Strain Fitness in Shewanella oneidensis MR-1 around SO1539

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,613,432	+				-0.4
1,613,432	+				+0.2
1,613,440	-				-0.0
1,613,448	+				+0.6
1,613,710	+				+0.3
1,613,794	-				+0.4
1,613,799	-				-0.0
1,613,799	-				+0.3
1,613,799	-				+0.5
1,614,007	+				+1.0
1,614,013	+				-0.3
1,614,013	+				+1.0
1,614,021	-				-0.5
1,614,047	+				-0.0
1,614,073	+				+1.0
1,614,235	+				-0.0
1,614,245	+				-0.4
1,614,264	+				+0.2
1,614,271	-				+0.5
1,614,310	+				-0.0
1,614,318	-				+0.5
1,614,405	+				-0.2
1,614,423	+				+0.0
1,614,428	+				+1.5
1,614,428	+				-0.8
1,614,428	+				+0.8
1,614,433	+				+0.0
1,614,436	-				+0.4
1,614,436	-				-0.0
1,614,441	-				-1.8
1,614,441	-				-0.0
1,614,495	+				+0.3
1,614,503	-				-0.1
1,614,555	-				+0.8
1,614,658	-		SO1539	0.15	+0.5
1,614,703	+		SO1539	0.18	+1.5
1,614,723	+		SO1539	0.19	+0.3
1,614,731	-		SO1539	0.20	+0.3
1,614,774	+		SO1539	0.22	-0.3
1,614,774	+		SO1539	0.22	+0.5
1,614,782	-		SO1539	0.23	+0.2
1,614,804	-		SO1539	0.24	-0.2
1,614,822	-		SO1539	0.25	-0.0
1,614,899	+		SO1539	0.30	+0.3
1,614,907	-		SO1539	0.31	-1.0
1,614,912	-		SO1539	0.31	+0.3
1,614,917	-		SO1539	0.31	-0.3
1,614,930	+		SO1539	0.32	-0.3
1,614,938	-		SO1539	0.33	-0.9
1,614,938	-		SO1539	0.33	+0.4
1,614,938	-		SO1539	0.33	-1.5
1,615,150	+		SO1539	0.46	-0.1
1,615,151	+				-0.0
1,615,251	+		SO1539	0.52	-0.2
1,615,251	+		SO1539	0.52	+0.1
1,615,251	+		SO1539	0.52	-0.8
1,615,259	-		SO1539	0.53	+1.1
1,615,274	-		SO1539	0.54	+0.0
1,615,355	-		SO1539	0.59	-0.2
1,615,406	-		SO1539	0.62	+0.4
1,615,457	+		SO1539	0.65	+1.0
1,615,810	+		SO1539	0.88	+0.1
1,615,810	+		SO1539	0.88	-0.0
1,615,810	+		SO1539	0.88	-0.3
1,615,810	+		SO1539	0.88	+1.2
1,615,811	-		SO1539	0.88	+0.8
1,615,818	-		SO1539	0.88	-0.2
1,615,818	-		SO1539	0.88	-0.7
1,615,850	+				+1.0
1,615,932	+				+0.1
1,615,966	-				+0.1
1,615,969	+				+1.2
1,615,982	-				-0.5
1,616,022	-				+0.2
1,616,088	+				-0.6
1,616,191	+				-0.2
1,616,199	-				-0.3
1,616,203	+				-0.1
1,616,211	-				+0.2
1,616,211	-				+0.1
1,616,235	+				-0.6
1,616,235	+				-0.1
1,616,270	+				-0.4
1,616,274	-				-0.5
1,616,292	+				-0.7
1,616,309	-				+1.4