Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_729 and HP15_730 are separated by 82 nucleotides HP15_730 and HP15_731 are separated by 137 nucleotides HP15_731 and HP15_732 are separated by 40 nucleotides HP15_732 and HP15_733 are separated by 3 nucleotides
HP15_729: HP15_729 - signal transduction protein with CBS domains, at 740,215 to 740,706
_729
HP15_730: HP15_730 - protein containing StAR-related lipid-transfer (START) domain, at 740,789 to 741,523
_730
HP15_731: HP15_731 - conserved hypothetical protein, at 741,661 to 742,668
_731
HP15_732: HP15_732 - septum formation topological specificity factor MinE, at 742,709 to 742,960
_732
HP15_733: HP15_733 - cell division inhibitor MinD, at 742,964 to 743,776
_733
Position (kb) 741
742
743 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 740.721 kb on - strand at 740.769 kb on + strand at 740.769 kb on + strand at 740.769 kb on + strand at 740.775 kb on - strand at 740.887 kb on - strand, within HP15_730 at 740.922 kb on + strand, within HP15_730 at 740.951 kb on + strand, within HP15_730 at 740.977 kb on - strand, within HP15_730 at 741.008 kb on - strand, within HP15_730 at 741.090 kb on - strand, within HP15_730 at 741.097 kb on + strand, within HP15_730 at 741.241 kb on - strand, within HP15_730 at 741.323 kb on - strand, within HP15_730 at 741.323 kb on - strand, within HP15_730 at 741.459 kb on + strand at 741.472 kb on - strand at 741.513 kb on - strand at 741.546 kb on - strand at 741.691 kb on + strand at 741.754 kb on - strand at 741.787 kb on - strand, within HP15_731 at 741.909 kb on + strand, within HP15_731 at 742.009 kb on - strand, within HP15_731 at 742.019 kb on - strand, within HP15_731 at 742.071 kb on + strand, within HP15_731 at 742.190 kb on + strand, within HP15_731 at 742.203 kb on - strand, within HP15_731 at 742.236 kb on + strand, within HP15_731 at 742.285 kb on + strand, within HP15_731 at 742.331 kb on - strand, within HP15_731 at 742.336 kb on + strand, within HP15_731 at 742.443 kb on + strand, within HP15_731 at 742.979 kb on - strand at 743.123 kb on + strand, within HP15_733 at 743.227 kb on + strand, within HP15_733 at 743.363 kb on + strand, within HP15_733 at 743.381 kb on - strand, within HP15_733 at 743.522 kb on + strand, within HP15_733 at 743.600 kb on + strand, within HP15_733 at 743.608 kb on - strand, within HP15_733 at 743.608 kb on - strand, within HP15_733 at 743.608 kb on - strand, within HP15_733 at 743.645 kb on + strand, within HP15_733
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.008 vol% remove 740,721 - +0.6 740,769 + -2.3 740,769 + +1.5 740,769 + +1.7 740,775 - -0.6 740,887 - HP15_730 0.13 +0.8 740,922 + HP15_730 0.18 -0.8 740,951 + HP15_730 0.22 +0.1 740,977 - HP15_730 0.26 +3.5 741,008 - HP15_730 0.30 +0.5 741,090 - HP15_730 0.41 +1.1 741,097 + HP15_730 0.42 -0.8 741,241 - HP15_730 0.61 -1.4 741,323 - HP15_730 0.73 -0.1 741,323 - HP15_730 0.73 +2.7 741,459 + -2.3 741,472 - -0.5 741,513 - -1.4 741,546 - +0.4 741,691 + +1.1 741,754 - +0.3 741,787 - HP15_731 0.12 +0.6 741,909 + HP15_731 0.25 -1.0 742,009 - HP15_731 0.35 -0.6 742,019 - HP15_731 0.36 +0.4 742,071 + HP15_731 0.41 +1.1 742,190 + HP15_731 0.52 -0.6 742,203 - HP15_731 0.54 -2.7 742,236 + HP15_731 0.57 +0.1 742,285 + HP15_731 0.62 -1.3 742,331 - HP15_731 0.66 -0.5 742,336 + HP15_731 0.67 -0.7 742,443 + HP15_731 0.78 -2.2 742,979 - -0.9 743,123 + HP15_733 0.20 -0.5 743,227 + HP15_733 0.32 +0.4 743,363 + HP15_733 0.49 +2.1 743,381 - HP15_733 0.51 +0.1 743,522 + HP15_733 0.69 +1.1 743,600 + HP15_733 0.78 -1.7 743,608 - HP15_733 0.79 +0.6 743,608 - HP15_733 0.79 -0.4 743,608 - HP15_733 0.79 +0.3 743,645 + HP15_733 0.84 -1.3
Or see this region's nucleotide sequence