Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_702 and HP15_703 are separated by 469 nucleotides HP15_703 and HP15_tRNA14 are separated by 21 nucleotides HP15_tRNA14 and HP15_704 are separated by 92 nucleotides
HP15_702: HP15_702 - conserved hypothetical protein, at 710,723 to 711,118
_702
HP15_703: HP15_703 - phage integrase, at 711,588 to 712,454
_703
HP15_tRNA14: HP15_tRNA14 - tRNA-Met, at 712,476 to 712,552
_tRNA14
HP15_704: HP15_704 - translation-associated GTPase, at 712,645 to 713,736
_704
Position (kb) 711
712
713 Strain fitness (log2 ratio) -1
0
1
2 at 710.753 kb on - strand at 710.755 kb on + strand at 710.939 kb on - strand, within HP15_702 at 710.949 kb on - strand, within HP15_702 at 710.956 kb on - strand, within HP15_702 at 710.956 kb on - strand, within HP15_702 at 710.980 kb on + strand, within HP15_702 at 710.995 kb on - strand, within HP15_702 at 711.019 kb on - strand, within HP15_702 at 711.038 kb on - strand, within HP15_702 at 711.059 kb on + strand, within HP15_702 at 711.067 kb on - strand, within HP15_702 at 711.144 kb on + strand at 711.162 kb on - strand at 711.265 kb on + strand at 711.461 kb on - strand at 711.537 kb on + strand at 711.582 kb on - strand at 711.613 kb on - strand at 711.854 kb on - strand, within HP15_703 at 711.856 kb on + strand, within HP15_703 at 711.861 kb on + strand, within HP15_703 at 711.861 kb on + strand, within HP15_703 at 711.874 kb on - strand, within HP15_703 at 711.904 kb on - strand, within HP15_703 at 712.064 kb on + strand, within HP15_703 at 712.177 kb on + strand, within HP15_703 at 712.180 kb on - strand, within HP15_703 at 712.180 kb on - strand, within HP15_703 at 712.240 kb on + strand, within HP15_703 at 712.300 kb on + strand, within HP15_703 at 712.334 kb on + strand, within HP15_703 at 712.342 kb on - strand, within HP15_703 at 712.617 kb on + strand at 713.172 kb on - strand, within HP15_704 at 713.366 kb on - strand, within HP15_704 at 713.384 kb on - strand, within HP15_704 at 713.384 kb on - strand, within HP15_704 at 713.412 kb on + strand, within HP15_704
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.008 vol% remove 710,753 - +0.1 710,755 + +1.7 710,939 - HP15_702 0.55 -0.7 710,949 - HP15_702 0.57 +0.4 710,956 - HP15_702 0.59 +1.0 710,956 - HP15_702 0.59 -0.7 710,980 + HP15_702 0.65 -0.6 710,995 - HP15_702 0.69 +2.6 711,019 - HP15_702 0.75 +0.4 711,038 - HP15_702 0.80 -0.1 711,059 + HP15_702 0.85 +0.5 711,067 - HP15_702 0.87 -0.7 711,144 + -0.0 711,162 - +0.4 711,265 + +2.2 711,461 - -0.0 711,537 + +0.1 711,582 - +1.1 711,613 - -1.1 711,854 - HP15_703 0.31 -0.6 711,856 + HP15_703 0.31 +1.1 711,861 + HP15_703 0.31 +0.4 711,861 + HP15_703 0.31 +0.2 711,874 - HP15_703 0.33 +0.1 711,904 - HP15_703 0.36 +0.2 712,064 + HP15_703 0.55 -0.4 712,177 + HP15_703 0.68 -0.4 712,180 - HP15_703 0.68 +1.4 712,180 - HP15_703 0.68 +0.4 712,240 + HP15_703 0.75 +0.4 712,300 + HP15_703 0.82 +0.1 712,334 + HP15_703 0.86 +0.7 712,342 - HP15_703 0.87 +0.6 712,617 + +0.5 713,172 - HP15_704 0.48 +0.9 713,366 - HP15_704 0.66 -0.7 713,384 - HP15_704 0.68 +0.1 713,384 - HP15_704 0.68 -0.7 713,412 + HP15_704 0.70 +0.1
Or see this region's nucleotide sequence