Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_309 and HP15_310 are separated by 151 nucleotides HP15_310 and HP15_311 are separated by 338 nucleotides HP15_311 and HP15_312 are separated by 19 nucleotides
HP15_309: HP15_309 - DNA helicase, ATP-dependent, RecG, at 299,540 to 301,615
_309
HP15_310: HP15_310 - signal transduction protein, at 301,767 to 303,131
_310
HP15_311: HP15_311 - protein containing domain of unknown function DUF2489, at 303,470 to 303,931
_311
HP15_312: HP15_312 - protein containing Molybdopterin oxidoreductase/molybdopterin dinucleotide-binding region, at 303,951 to 306,245
_312
Position (kb) 301
302
303
304 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 300.767 kb on - strand, within HP15_309 at 300.863 kb on + strand, within HP15_309 at 300.871 kb on - strand, within HP15_309 at 300.871 kb on - strand, within HP15_309 at 301.036 kb on + strand, within HP15_309 at 301.044 kb on - strand, within HP15_309 at 301.058 kb on + strand, within HP15_309 at 301.122 kb on - strand, within HP15_309 at 301.150 kb on + strand, within HP15_309 at 301.264 kb on - strand, within HP15_309 at 301.439 kb on + strand at 301.486 kb on + strand at 301.501 kb on + strand at 301.566 kb on - strand at 301.618 kb on - strand at 301.698 kb on + strand at 301.816 kb on + strand at 301.857 kb on - strand at 301.874 kb on + strand at 301.877 kb on - strand at 301.882 kb on - strand at 302.003 kb on + strand, within HP15_310 at 302.016 kb on - strand, within HP15_310 at 302.051 kb on - strand, within HP15_310 at 302.053 kb on + strand, within HP15_310 at 302.087 kb on + strand, within HP15_310 at 302.106 kb on - strand, within HP15_310 at 302.134 kb on + strand, within HP15_310 at 302.305 kb on + strand, within HP15_310 at 302.313 kb on - strand, within HP15_310 at 302.313 kb on - strand, within HP15_310 at 302.426 kb on + strand, within HP15_310 at 302.495 kb on + strand, within HP15_310 at 302.655 kb on - strand, within HP15_310 at 302.681 kb on - strand, within HP15_310 at 302.738 kb on - strand, within HP15_310 at 302.778 kb on - strand, within HP15_310 at 302.881 kb on + strand, within HP15_310 at 303.224 kb on - strand at 303.357 kb on + strand at 303.443 kb on + strand at 303.634 kb on - strand, within HP15_311 at 303.795 kb on + strand, within HP15_311 at 303.802 kb on - strand, within HP15_311 at 303.805 kb on + strand, within HP15_311 at 303.818 kb on - strand, within HP15_311 at 303.957 kb on - strand at 303.957 kb on - strand at 303.966 kb on - strand at 303.986 kb on - strand at 304.056 kb on - strand at 304.085 kb on - strand at 304.101 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. methylglyoxal 0.008 vol% remove 300,767 - HP15_309 0.59 -3.2 300,863 + HP15_309 0.64 -0.8 300,871 - HP15_309 0.64 -2.4 300,871 - HP15_309 0.64 -1.7 301,036 + HP15_309 0.72 -1.8 301,044 - HP15_309 0.72 -0.5 301,058 + HP15_309 0.73 +0.6 301,122 - HP15_309 0.76 -1.9 301,150 + HP15_309 0.78 -2.4 301,264 - HP15_309 0.83 +1.8 301,439 + -3.7 301,486 + -0.4 301,501 + +0.2 301,566 - -1.1 301,618 - +0.7 301,698 + -0.6 301,816 + +0.7 301,857 - +0.3 301,874 + -1.1 301,877 - -0.0 301,882 - +0.6 302,003 + HP15_310 0.17 -0.9 302,016 - HP15_310 0.18 -0.2 302,051 - HP15_310 0.21 +0.6 302,053 + HP15_310 0.21 -0.5 302,087 + HP15_310 0.23 -0.7 302,106 - HP15_310 0.25 +1.5 302,134 + HP15_310 0.27 -0.9 302,305 + HP15_310 0.39 -0.5 302,313 - HP15_310 0.40 +0.1 302,313 - HP15_310 0.40 -2.1 302,426 + HP15_310 0.48 -0.9 302,495 + HP15_310 0.53 +0.8 302,655 - HP15_310 0.65 +0.8 302,681 - HP15_310 0.67 -0.2 302,738 - HP15_310 0.71 -0.6 302,778 - HP15_310 0.74 +1.8 302,881 + HP15_310 0.82 +0.8 303,224 - -1.0 303,357 + +0.2 303,443 + -0.9 303,634 - HP15_311 0.35 +0.2 303,795 + HP15_311 0.70 +0.1 303,802 - HP15_311 0.72 +2.2 303,805 + HP15_311 0.73 -0.2 303,818 - HP15_311 0.75 +0.0 303,957 - +1.6 303,957 - -0.0 303,966 - -0.4 303,986 - -2.0 304,056 - -1.5 304,085 - +0.0 304,101 + -0.1
Or see this region's nucleotide sequence