Strain Fitness in Marinobacter adhaerens HP15 around HP15_1531
Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. methylglyoxal 0.008 vol% |
---|---|---|---|---|---|
remove | |||||
1,611,643 | + | -0.8 | |||
1,611,676 | - | -3.2 | |||
1,611,853 | + | HP15_1530 | 0.25 | -0.3 | |
1,611,853 | + | HP15_1530 | 0.25 | -2.8 | |
1,611,911 | + | HP15_1530 | 0.31 | -3.0 | |
1,612,092 | - | HP15_1530 | 0.49 | -1.9 | |
1,612,587 | - | +1.4 | |||
1,612,587 | - | -0.1 | |||
1,612,624 | + | +1.7 | |||
1,612,624 | + | +0.6 | |||
1,612,630 | + | +1.2 | |||
1,612,638 | - | +1.5 | |||
1,612,678 | + | -2.4 | |||
1,612,791 | + | HP15_1531 | 0.21 | -0.4 | |
1,612,812 | + | HP15_1531 | 0.24 | +0.1 | |
1,612,932 | + | HP15_1531 | 0.36 | -0.8 | |
1,612,966 | - | HP15_1531 | 0.40 | -2.1 | |
1,612,966 | - | HP15_1531 | 0.40 | -0.2 | |
1,612,966 | - | HP15_1531 | 0.40 | -0.4 | |
1,613,205 | + | HP15_1531 | 0.66 | +0.8 | |
1,613,247 | + | HP15_1531 | 0.70 | -0.3 | |
1,613,264 | - | HP15_1531 | 0.72 | -0.1 | |
1,613,266 | + | HP15_1531 | 0.72 | -0.6 | |
1,613,357 | - | HP15_1531 | 0.82 | -0.8 | |
1,613,707 | - | +0.9 | |||
1,613,707 | - | +0.2 | |||
1,613,717 | - | +2.2 | |||
1,614,407 | + | HP15_1532 | 0.88 | -1.7 |
Or see this region's nucleotide sequence