Strain Fitness in Marinobacter adhaerens HP15 around HP15_1309
Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. methylglyoxal 0.008 vol% |
---|---|---|---|---|---|
remove | |||||
1,368,347 | + | +1.9 | |||
1,368,438 | + | HP15_1308 | 0.10 | -0.9 | |
1,368,463 | + | HP15_1308 | 0.15 | -1.4 | |
1,368,471 | - | HP15_1308 | 0.16 | -0.4 | |
1,368,504 | - | HP15_1308 | 0.23 | -0.7 | |
1,368,692 | - | HP15_1308 | 0.59 | +0.2 | |
1,368,719 | + | HP15_1308 | 0.65 | +0.4 | |
1,368,719 | + | HP15_1308 | 0.65 | -0.8 | |
1,368,750 | - | HP15_1308 | 0.71 | +0.2 | |
1,368,793 | + | HP15_1308 | 0.79 | -0.4 | |
1,368,799 | + | HP15_1308 | 0.80 | -0.4 | |
1,368,799 | + | HP15_1308 | 0.80 | +1.4 | |
1,368,799 | + | HP15_1308 | 0.80 | -0.1 | |
1,368,807 | - | HP15_1308 | 0.82 | -0.6 | |
1,368,851 | + | -1.2 | |||
1,368,888 | - | +1.8 | |||
1,369,156 | + | HP15_1309 | 0.64 | +1.2 | |
1,369,521 | + | +1.0 | |||
1,369,539 | - | -0.5 | |||
1,369,712 | + | HP15_1310 | 0.16 | +0.7 | |
1,369,761 | - | HP15_1310 | 0.18 | -0.2 | |
1,369,779 | - | HP15_1310 | 0.19 | +0.2 | |
1,369,872 | + | HP15_1310 | 0.24 | +0.2 | |
1,369,952 | - | HP15_1310 | 0.28 | +0.1 | |
1,369,953 | - | HP15_1310 | 0.28 | +0.5 | |
1,369,953 | - | HP15_1310 | 0.28 | -2.1 | |
1,370,048 | - | HP15_1310 | 0.32 | -0.2 | |
1,370,055 | - | HP15_1310 | 0.33 | +1.1 | |
1,370,109 | - | HP15_1310 | 0.35 | +0.6 | |
1,370,272 | - | HP15_1310 | 0.43 | +0.7 |
Or see this region's nucleotide sequence