Strain Fitness in Marinobacter adhaerens HP15 around HP15_1305
Experiment: m.b. methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. methylglyoxal 0.008 vol% |
---|---|---|---|---|---|
remove | |||||
1,363,361 | - | HP15_1303 | 0.21 | +1.0 | |
1,363,393 | + | HP15_1303 | 0.25 | -0.2 | |
1,363,457 | + | HP15_1303 | 0.34 | -0.2 | |
1,363,636 | - | HP15_1303 | 0.56 | +0.2 | |
1,363,669 | + | HP15_1303 | 0.60 | +0.2 | |
1,363,671 | + | HP15_1303 | 0.61 | -0.1 | |
1,363,677 | - | HP15_1303 | 0.61 | -0.2 | |
1,363,679 | - | HP15_1303 | 0.62 | -0.6 | |
1,363,679 | - | HP15_1303 | 0.62 | +1.8 | |
1,363,679 | - | HP15_1303 | 0.62 | +3.8 | |
1,363,751 | + | HP15_1303 | 0.71 | +0.2 | |
1,363,980 | + | -0.9 | |||
1,363,997 | - | +0.8 | |||
1,364,069 | + | HP15_1304 | 0.23 | -0.1 | |
1,364,321 | - | -0.9 | |||
1,365,194 | - | +0.3 | |||
1,365,246 | + | +1.1 | |||
1,365,248 | - | -0.2 | |||
1,365,278 | + | +0.5 | |||
1,365,375 | - | -0.7 | |||
1,365,395 | - | +0.8 | |||
1,365,483 | + | +0.9 | |||
1,365,488 | + | -0.6 | |||
1,365,534 | + | +3.0 | |||
1,365,552 | - | +1.4 | |||
1,365,652 | - | HP15_1306 | 0.11 | -0.6 | |
1,365,710 | - | HP15_1306 | 0.14 | +0.4 | |
1,365,864 | + | HP15_1306 | 0.21 | +3.2 | |
1,365,923 | + | HP15_1306 | 0.23 | -0.9 | |
1,365,923 | + | HP15_1306 | 0.23 | -0.5 | |
1,365,928 | + | HP15_1306 | 0.23 | -1.2 | |
1,365,933 | + | HP15_1306 | 0.24 | +1.2 | |
1,366,083 | + | HP15_1306 | 0.30 | +0.3 | |
1,366,136 | - | HP15_1306 | 0.32 | -0.4 |
Or see this region's nucleotide sequence