Strain Fitness in Shewanella amazonensis SB2B around Sama_1170

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,426,767	-				+0.0
1,426,767	-				+0.2
1,426,767	-				+0.4
1,426,767	-				+1.5
1,426,767	-				-0.2
1,426,767	-				+0.8
1,426,847	+				-0.5
1,426,848	-				+0.4
1,426,863	+				+0.5
1,426,863	+				+0.2
1,426,864	-				+0.3
1,426,925	-				-2.0
1,426,935	+				+1.2
1,426,945	+				-1.0
1,426,945	+				+1.7
1,426,946	-				-1.3
1,426,966	+				+0.8
1,427,005	+				-2.2
1,427,006	-				-1.7
1,427,006	-				-2.2
1,427,013	+				-1.5
1,427,013	+				-0.2
1,427,014	-				-2.0
1,427,025	+				-2.3
1,427,208	+		Sama_1169	0.27	-2.4
1,427,208	+		Sama_1169	0.27	-0.1
1,427,209	-		Sama_1169	0.27	+0.5
1,427,316	+		Sama_1169	0.41	-2.3
1,427,375	-		Sama_1169	0.49	-2.1
1,427,375	-		Sama_1169	0.49	-1.2
1,427,448	+		Sama_1169	0.59	-1.0
1,427,448	+		Sama_1169	0.59	-1.7
1,427,448	+		Sama_1169	0.59	-1.3
1,427,448	+		Sama_1169	0.59	-1.2
1,427,448	+		Sama_1169	0.59	-3.7
1,427,448	+		Sama_1169	0.59	-0.7
1,427,449	-		Sama_1169	0.59	-1.5
1,427,449	-		Sama_1169	0.59	-0.4
1,427,449	-		Sama_1169	0.59	-1.4
1,427,449	-		Sama_1169	0.59	-1.6
1,427,503	+		Sama_1169	0.66	-1.7
1,427,504	-		Sama_1169	0.66	-0.4
1,427,558	+		Sama_1169	0.74	-1.7
1,427,650	+		Sama_1169	0.86	-2.2
1,427,650	+		Sama_1169	0.86	-1.5
1,427,650	+		Sama_1169	0.86	-1.2
1,427,650	+		Sama_1169	0.86	-1.5
1,427,650	+		Sama_1169	0.86	-1.6
1,427,650	+		Sama_1169	0.86	+0.4
1,427,651	-		Sama_1169	0.86	-0.8
1,427,651	-		Sama_1169	0.86	-1.5
1,427,756	+				-0.5
1,427,756	+				-1.2
1,427,756	+				-1.4
1,427,756	+				+0.2
1,427,757	-				-1.1
1,427,786	+				-1.5
1,427,873	+		Sama_1170	0.13	-1.5
1,427,873	+		Sama_1170	0.13	-0.7
1,427,874	-		Sama_1170	0.13	-0.6
1,427,874	-		Sama_1170	0.13	-1.2
1,427,949	+		Sama_1170	0.21	-1.5
1,427,949	+		Sama_1170	0.21	+0.5
1,427,950	-		Sama_1170	0.21	-0.9
1,427,950	-		Sama_1170	0.21	-0.8
1,428,006	+		Sama_1170	0.27	-1.6
1,428,006	+		Sama_1170	0.27	-0.7
1,428,007	-		Sama_1170	0.27	-0.1
1,428,007	-		Sama_1170	0.27	-1.8
1,428,079	+		Sama_1170	0.35	-1.2
1,428,079	+		Sama_1170	0.35	+0.3
1,428,079	+		Sama_1170	0.35	-2.2
1,428,079	+		Sama_1170	0.35	-0.6
1,428,079	+		Sama_1170	0.35	+0.8
1,428,106	+		Sama_1170	0.38	-0.8
1,428,106	+		Sama_1170	0.38	-1.2
1,428,119	+		Sama_1170	0.39	-1.1
1,428,119	+		Sama_1170	0.39	-0.4
1,428,134	+		Sama_1170	0.41	-2.4
1,428,135	-		Sama_1170	0.41	-2.4
1,428,135	-		Sama_1170	0.41	-1.5
1,428,135	-		Sama_1170	0.41	+0.2
1,428,135	-		Sama_1170	0.41	-1.6
1,428,135	-		Sama_1170	0.41	-0.5
1,428,138	+		Sama_1170	0.41	-1.9
1,428,138	+		Sama_1170	0.41	-1.9
1,428,139	-		Sama_1170	0.41	-2.1
1,428,286	+		Sama_1170	0.57	-2.3
1,428,287	-		Sama_1170	0.57	-0.9
1,428,339	-		Sama_1170	0.63	-0.5
1,428,339	-		Sama_1170	0.63	-0.5
1,428,359	+		Sama_1170	0.65	-2.4
1,428,510	+		Sama_1170	0.81	-1.7
1,428,510	+		Sama_1170	0.81	+0.6
1,428,510	+		Sama_1170	0.81	-0.6
1,428,524	+		Sama_1170	0.83	-2.3
1,428,525	-		Sama_1170	0.83	-1.6
1,428,605	+				-1.4
1,428,605	+				-2.5
1,428,606	-				-1.1
1,428,624	+				-1.3
1,428,667	+				-1.2
1,428,667	+				-1.2
1,428,668	-				+0.2
1,428,678	+				-0.6
1,428,742	+				+0.9
1,428,777	-				-0.9
1,428,797	+				+0.3
1,428,798	-				-0.0
1,428,807	+				+0.0
1,428,807	+				+1.5
1,428,807	+				-0.5
1,428,807	+				+0.0
1,428,808	-				-2.7
1,428,839	+				+0.5
1,428,840	-				-0.1
1,428,862	+				-1.9
1,428,863	+				+0.2
1,428,863	+				-0.5
1,428,863	+				-0.4
1,428,863	+				-0.4
1,428,911	+				-0.0
1,428,911	+				-1.5
1,428,911	+				+0.8
1,428,912	-				-0.8
1,428,914	+				-0.2
1,428,915	-				+0.2
1,428,941	+				+0.1
1,428,941	+				-2.0
1,428,941	+				-3.1
1,428,942	-				-2.8
1,428,942	-				-0.0
1,428,942	-				+0.2
1,428,942	-				-0.3
1,428,942	-				-0.7
1,428,942	-				-1.8
1,428,945	+				+0.7
1,428,945	+				-0.1
1,428,945	+				-0.3
1,428,945	+				-1.3
1,428,948	+				+0.6
1,428,949	-				-1.5
1,428,964	+				+2.2
1,428,964	+				-1.5
1,428,983	+				-0.5
1,429,026	+				-0.6
1,429,054	+				+0.7
1,429,054	+				+0.1
1,429,054	+				+1.3
1,429,055	-				-0.2
1,429,059	+				-1.1
1,429,060	-				-2.1
1,429,105	+				-1.2
1,429,105	+				-2.6
1,429,106	-				-0.6
1,429,130	-				+0.6
1,429,269	+		Sama_1171	0.14	+0.5
1,429,270	-		Sama_1171	0.14	-1.0
1,429,270	-		Sama_1171	0.14	-0.6
1,429,270	-		Sama_1171	0.14	-0.4
1,429,271	+		Sama_1171	0.15	-0.5
1,429,271	+		Sama_1171	0.15	-0.2
1,429,271	+		Sama_1171	0.15	-1.5
1,429,272	-		Sama_1171	0.15	-0.5
1,429,316	+		Sama_1171	0.17	-0.3
1,429,316	+		Sama_1171	0.17	+0.6
1,429,317	-		Sama_1171	0.17	+0.2
1,429,317	-		Sama_1171	0.17	-1.2
1,429,317	-		Sama_1171	0.17	+0.8
1,429,317	-		Sama_1171	0.17	+0.8
1,429,364	+		Sama_1171	0.20	-0.9
1,429,365	-		Sama_1171	0.21	+0.7
1,429,365	-		Sama_1171	0.21	+1.1
1,429,373	+		Sama_1171	0.21	-0.5
1,429,374	-		Sama_1171	0.21	+0.3
1,429,439	+		Sama_1171	0.25	-0.3
1,429,439	+		Sama_1171	0.25	-0.1
1,429,439	+		Sama_1171	0.25	-0.2
1,429,439	+		Sama_1171	0.25	+0.4
1,429,482	+		Sama_1171	0.28	+1.8
1,429,483	-		Sama_1171	0.28	+1.3
1,429,485	+		Sama_1171	0.28	+0.9
1,429,486	-		Sama_1171	0.28	-0.1
1,429,486	-		Sama_1171	0.28	-2.6
1,429,486	-		Sama_1171	0.28	+0.0
1,429,487	+		Sama_1171	0.28	+1.3
1,429,487	+		Sama_1171	0.28	-0.8
1,429,488	-		Sama_1171	0.28	+0.5
1,429,488	-		Sama_1171	0.28	-0.6
1,429,488	-		Sama_1171	0.28	+0.4
1,429,488	-		Sama_1171	0.28	-1.2
1,429,509	+		Sama_1171	0.30	-0.0
1,429,572	+		Sama_1171	0.34	+0.1
1,429,572	+		Sama_1171	0.34	-0.1
1,429,572	+		Sama_1171	0.34	-0.2
1,429,573	-		Sama_1171	0.34	-0.5
1,429,668	+		Sama_1171	0.40	-1.1
1,429,669	-		Sama_1171	0.40	-0.7