Strain Fitness in Shewanella amazonensis SB2B around Sama_1065

Experiment: L-Leucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (N)
1,288,798	+		Sama_1063	0.67	-3.9
1,288,798	+		Sama_1063	0.67	-2.8
1,288,798	+		Sama_1063	0.67	-1.3
1,288,808	-		Sama_1063	0.68	-4.3
1,288,808	-		Sama_1063	0.68	-1.9
1,288,865	+		Sama_1063	0.74	-3.1
1,288,865	+		Sama_1063	0.74	-2.1
1,288,866	-		Sama_1063	0.74	-3.3
1,288,866	-		Sama_1063	0.74	-2.9
1,288,866	-		Sama_1063	0.74	-3.8
1,288,866	-		Sama_1063	0.74	-1.7
1,288,894	+		Sama_1063	0.76	-2.0
1,289,049	-				-1.9
1,289,049	-				-4.1
1,289,099	+				-0.7
1,289,100	-				-0.9
1,289,100	-				-0.7
1,289,100	-				-3.7
1,289,124	+				-1.5
1,289,125	-				-1.1
1,289,154	+				-2.9
1,289,154	+				-3.7
1,289,154	+				-2.9
1,289,154	+				-2.2
1,289,155	-				-1.9
1,289,508	-		Sama_1064	0.72	-2.7
1,289,550	+		Sama_1064	0.81	-1.2
1,289,567	-		Sama_1064	0.84	-3.1
1,289,622	-				-1.8
1,289,647	+				-2.4
1,289,674	+				-1.6
1,289,675	-				+0.6
1,289,698	+				-2.2
1,289,733	+				-2.2
1,289,766	+				-1.1
1,289,766	+				-2.6
1,289,766	+				-2.6
1,289,766	+				-2.9
1,289,766	+				-2.2
1,289,767	-				+0.2
1,289,775	-				-0.2
1,289,828	+				+0.5
1,289,828	+				+1.1
1,289,828	+				+1.1
1,289,829	-				-0.3
1,289,829	-				+0.1
1,289,830	+				+1.2
1,289,934	+		Sama_1065	0.12	-1.2
1,289,934	+		Sama_1065	0.12	-0.7
1,289,934	+		Sama_1065	0.12	-2.1
1,289,935	-		Sama_1065	0.12	+1.3
1,289,962	+		Sama_1065	0.15	+0.9
1,289,981	+		Sama_1065	0.16	-0.6
1,290,065	-		Sama_1065	0.24	-0.4
1,290,065	-		Sama_1065	0.24	-1.1
1,290,091	+		Sama_1065	0.26	-0.7
1,290,091	+		Sama_1065	0.26	+2.0
1,290,092	-		Sama_1065	0.26	-0.6
1,290,092	-		Sama_1065	0.26	+0.5
1,290,092	-		Sama_1065	0.26	-0.5
1,290,093	+		Sama_1065	0.26	-1.5
1,290,148	+		Sama_1065	0.31	-0.4
1,290,148	+		Sama_1065	0.31	+0.3
1,290,149	-		Sama_1065	0.31	-0.1
1,290,208	+		Sama_1065	0.36	+0.7
1,290,208	+		Sama_1065	0.36	-0.1
1,290,209	-		Sama_1065	0.36	-2.3
1,290,266	+		Sama_1065	0.41	-0.5
1,290,266	+		Sama_1065	0.41	-0.3
1,290,281	+		Sama_1065	0.42	-0.8
1,290,282	-		Sama_1065	0.43	+0.3
1,290,282	-		Sama_1065	0.43	-1.9
1,290,347	+		Sama_1065	0.48	+0.5
1,290,347	+		Sama_1065	0.48	+0.2
1,290,347	+		Sama_1065	0.48	-0.7
1,290,347	+		Sama_1065	0.48	+0.8
1,290,347	+		Sama_1065	0.48	+1.0
1,290,347	+		Sama_1065	0.48	+0.1
1,290,348	-		Sama_1065	0.48	+1.0
1,290,348	-		Sama_1065	0.48	+1.9
1,290,348	-		Sama_1065	0.48	-1.8
1,290,348	-		Sama_1065	0.48	+1.0
1,290,351	+		Sama_1065	0.49	+1.1
1,290,352	-		Sama_1065	0.49	+1.6
1,290,352	-		Sama_1065	0.49	-0.3
1,290,352	-		Sama_1065	0.49	-1.0
1,290,352	-		Sama_1065	0.49	+0.5
1,290,413	-		Sama_1065	0.54	-0.1
1,290,438	-		Sama_1065	0.56	-0.9
1,290,438	-		Sama_1065	0.56	-0.6
1,290,460	+		Sama_1065	0.58	+3.2
1,290,460	+		Sama_1065	0.58	-0.8
1,290,461	-		Sama_1065	0.58	-0.2
1,290,461	-		Sama_1065	0.58	+0.1
1,290,461	-		Sama_1065	0.58	+0.5
1,290,461	-		Sama_1065	0.58	+0.9
1,290,490	+		Sama_1065	0.61	-0.2
1,290,490	+		Sama_1065	0.61	+0.0
1,290,491	-		Sama_1065	0.61	+0.3
1,290,491	-		Sama_1065	0.61	+0.7
1,290,508	-		Sama_1065	0.62	-0.7
1,290,529	+		Sama_1065	0.64	-1.5
1,290,529	+		Sama_1065	0.64	+1.6
1,290,581	-		Sama_1065	0.69	-0.2
1,290,588	-		Sama_1065	0.69	+0.4
1,290,602	+		Sama_1065	0.71	+0.1
1,290,604	+		Sama_1065	0.71	+0.5
1,290,604	+		Sama_1065	0.71	-1.7
1,290,604	+		Sama_1065	0.71	-0.5
1,290,604	+		Sama_1065	0.71	+0.3
1,290,604	+		Sama_1065	0.71	-2.1
1,290,604	+		Sama_1065	0.71	+0.1
1,290,604	+		Sama_1065	0.71	-0.1
1,290,604	+		Sama_1065	0.71	-0.0
1,290,605	-		Sama_1065	0.71	+0.2
1,290,605	-		Sama_1065	0.71	+0.2
1,290,605	-		Sama_1065	0.71	+1.6
1,290,605	-		Sama_1065	0.71	-0.8
1,290,605	-		Sama_1065	0.71	+0.2
1,290,623	-		Sama_1065	0.72	-1.2
1,290,712	+		Sama_1065	0.80	-1.4
1,290,712	+		Sama_1065	0.80	+0.4
1,290,713	-		Sama_1065	0.80	-0.5
1,290,713	-		Sama_1065	0.80	+0.6
1,290,713	-		Sama_1065	0.80	-0.2
1,290,713	-		Sama_1065	0.80	+0.3
1,290,722	+		Sama_1065	0.81	-0.2
1,290,723	-		Sama_1065	0.81	+0.6
1,290,723	-		Sama_1065	0.81	+1.2
1,290,723	-		Sama_1065	0.81	-2.1
1,290,745	+		Sama_1065	0.83	-0.2
1,290,745	+		Sama_1065	0.83	+1.5
1,290,745	+		Sama_1065	0.83	-0.1
1,290,746	-		Sama_1065	0.83	+0.7
1,290,746	-		Sama_1065	0.83	+0.4
1,290,746	-		Sama_1065	0.83	+0.8
1,290,789	-		Sama_1065	0.87	+0.5
1,290,833	+				+0.8
1,290,834	-				+1.3
1,290,834	-				-1.8
1,290,840	-				+1.4
1,290,871	+				-0.1
1,290,871	+				+0.4
1,290,905	+				-1.4
1,290,905	+				+1.0
1,290,905	+				+0.2
1,290,905	+				+1.0
1,290,906	-				+1.7
1,290,906	-				-1.1
1,290,906	-				+0.3
1,290,906	-				+0.4
1,290,906	-				-0.4
1,290,908	+				+0.3
1,290,909	-				-1.0
1,290,967	+				-0.7
1,290,968	-				-0.4
1,290,968	-				-1.0
1,291,008	-				+0.4
1,291,008	-				-0.7
1,291,056	+				+0.8
1,291,056	+				+0.2
1,291,056	+				-2.3
1,291,162	+				-0.2
1,291,164	+				+0.9
1,291,164	+				-0.1
1,291,165	-				-1.0
1,291,207	-		Sama_1066	0.11	-1.1
1,291,207	-		Sama_1066	0.11	-1.4
1,291,243	+		Sama_1066	0.14	+1.3
1,291,244	-		Sama_1066	0.14	+0.6
1,291,245	+		Sama_1066	0.14	-0.7
1,291,245	+		Sama_1066	0.14	+0.3
1,291,245	+		Sama_1066	0.14	-1.3
1,291,245	+		Sama_1066	0.14	+0.2
1,291,245	+		Sama_1066	0.14	+0.9
1,291,245	+		Sama_1066	0.14	+0.5
1,291,245	+		Sama_1066	0.14	+1.0
1,291,246	-		Sama_1066	0.14	-0.5
1,291,246	-		Sama_1066	0.14	+0.7
1,291,246	-		Sama_1066	0.14	+0.9
1,291,246	-		Sama_1066	0.14	-0.2
1,291,257	+		Sama_1066	0.15	-1.4
1,291,257	+		Sama_1066	0.15	-0.5
1,291,258	-		Sama_1066	0.15	-0.5
1,291,258	-		Sama_1066	0.15	+0.1
1,291,275	+		Sama_1066	0.16	+1.5
1,291,275	+		Sama_1066	0.16	+1.1
1,291,275	+		Sama_1066	0.16	+1.1
1,291,275	+		Sama_1066	0.16	+0.6
1,291,275	+		Sama_1066	0.16	-0.5
1,291,276	-		Sama_1066	0.16	-0.1
1,291,276	-		Sama_1066	0.16	-3.1
1,291,276	-		Sama_1066	0.16	+0.1
1,291,276	-		Sama_1066	0.16	-0.9
1,291,290	-		Sama_1066	0.17	-0.2
1,291,532	+		Sama_1066	0.34	+0.6
1,291,532	+		Sama_1066	0.34	-2.6
1,291,532	+		Sama_1066	0.34	-0.3
1,291,533	-		Sama_1066	0.35	-0.8
1,291,533	-		Sama_1066	0.35	+1.1
1,291,543	+		Sama_1066	0.35	+0.1
1,291,563	-		Sama_1066	0.37	+0.5
1,291,563	-		Sama_1066	0.37	-0.0
1,291,653	-		Sama_1066	0.43	+0.3
1,291,653	-		Sama_1066	0.43	-2.0
1,291,716	+		Sama_1066	0.48	-0.6
1,291,717	-		Sama_1066	0.48	-0.7
1,291,717	-		Sama_1066	0.48	+0.6
1,291,759	+		Sama_1066	0.51	+0.3
1,291,760	-		Sama_1066	0.51	+0.7
1,291,887	+		Sama_1066	0.60	+1.8
1,291,887	+		Sama_1066	0.60	-1.1
1,291,887	+		Sama_1066	0.60	-0.9
1,291,887	+		Sama_1066	0.60	+0.3
1,291,888	-		Sama_1066	0.60	+0.2
1,291,888	-		Sama_1066	0.60	-1.2