Experiment: nitrite (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0751 and Psest_0752 are separated by 99 nucleotides Psest_0752 and Psest_0753 are separated by 267 nucleotides
Psest_0751: Psest_0751 - Arabinose efflux permease, at 822,152 to 823,333
_0751
Psest_0752: Psest_0752 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 823,433 to 824,422
_0752
Psest_0753: Psest_0753 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 824,690 to 825,814
_0753
Position (kb) 823
824
825 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.828 kb on + strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.829 kb on - strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.981 kb on + strand, within Psest_0751 at 822.982 kb on - strand, within Psest_0751 at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.325 kb on + strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.326 kb on - strand at 823.449 kb on + strand at 823.449 kb on + strand at 823.449 kb on + strand at 823.449 kb on + strand at 823.449 kb on + strand at 823.602 kb on + strand, within Psest_0752 at 823.602 kb on + strand, within Psest_0752 at 823.602 kb on + strand, within Psest_0752 at 823.603 kb on - strand, within Psest_0752 at 823.603 kb on - strand, within Psest_0752 at 823.603 kb on - strand, within Psest_0752 at 823.664 kb on - strand, within Psest_0752 at 823.950 kb on + strand, within Psest_0752 at 823.950 kb on + strand, within Psest_0752 at 823.950 kb on + strand, within Psest_0752 at 823.950 kb on + strand, within Psest_0752 at 823.950 kb on + strand, within Psest_0752 at 823.950 kb on + strand, within Psest_0752 at 823.951 kb on - strand, within Psest_0752 at 823.951 kb on - strand, within Psest_0752 at 823.951 kb on - strand, within Psest_0752 at 823.951 kb on - strand, within Psest_0752 at 823.951 kb on - strand, within Psest_0752 at 823.990 kb on - strand, within Psest_0752 at 824.296 kb on - strand, within Psest_0752 at 824.296 kb on - strand, within Psest_0752 at 824.388 kb on + strand at 824.388 kb on + strand at 824.512 kb on + strand at 824.512 kb on + strand at 824.513 kb on - strand at 824.513 kb on - strand at 824.513 kb on - strand at 824.513 kb on - strand at 824.513 kb on - strand at 824.513 kb on - strand at 824.699 kb on - strand at 824.710 kb on + strand at 824.710 kb on + strand at 824.710 kb on + strand at 824.711 kb on - strand at 824.711 kb on - strand at 824.739 kb on + strand at 824.740 kb on - strand at 824.743 kb on + strand at 824.744 kb on - strand at 824.744 kb on - strand at 824.822 kb on + strand, within Psest_0753 at 824.822 kb on + strand, within Psest_0753 at 824.822 kb on + strand, within Psest_0753 at 824.822 kb on + strand, within Psest_0753 at 824.823 kb on - strand, within Psest_0753 at 824.823 kb on - strand, within Psest_0753 at 824.826 kb on - strand, within Psest_0753 at 824.826 kb on - strand, within Psest_0753 at 824.894 kb on + strand, within Psest_0753 at 824.894 kb on + strand, within Psest_0753 at 824.895 kb on - strand, within Psest_0753 at 825.182 kb on + strand, within Psest_0753 at 825.182 kb on + strand, within Psest_0753 at 825.183 kb on - strand, within Psest_0753 at 825.302 kb on + strand, within Psest_0753 at 825.334 kb on + strand, within Psest_0753 at 825.334 kb on + strand, within Psest_0753
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite (N) remove 822,828 + Psest_0751 0.57 -0.6 822,828 + Psest_0751 0.57 +2.5 822,828 + Psest_0751 0.57 +0.4 822,828 + Psest_0751 0.57 +1.0 822,828 + Psest_0751 0.57 +0.2 822,828 + Psest_0751 0.57 +0.6 822,828 + Psest_0751 0.57 +2.0 822,828 + Psest_0751 0.57 -0.5 822,829 - Psest_0751 0.57 -0.9 822,829 - Psest_0751 0.57 +1.5 822,829 - Psest_0751 0.57 +3.2 822,829 - Psest_0751 0.57 +1.1 822,981 + Psest_0751 0.70 +1.0 822,981 + Psest_0751 0.70 -0.4 822,981 + Psest_0751 0.70 +2.0 822,981 + Psest_0751 0.70 +2.0 822,981 + Psest_0751 0.70 -0.0 822,981 + Psest_0751 0.70 -0.5 822,981 + Psest_0751 0.70 -0.0 822,982 - Psest_0751 0.70 -1.1 823,325 + +1.4 823,325 + +2.0 823,325 + +1.0 823,325 + +1.0 823,325 + +2.0 823,325 + +1.8 823,325 + -0.0 823,325 + +1.5 823,325 + +1.1 823,325 + -0.4 823,325 + -0.5 823,325 + -0.5 823,325 + +0.7 823,325 + +0.1 823,325 + +2.0 823,326 - +0.4 823,326 - -0.9 823,326 - +1.0 823,326 - +0.1 823,326 - -2.0 823,326 - +2.0 823,326 - +0.4 823,326 - +2.0 823,326 - +1.0 823,449 + -1.4 823,449 + +1.0 823,449 + +1.4 823,449 + +1.6 823,449 + +0.8 823,602 + Psest_0752 0.17 +1.0 823,602 + Psest_0752 0.17 -0.0 823,602 + Psest_0752 0.17 -0.9 823,603 - Psest_0752 0.17 -0.4 823,603 - Psest_0752 0.17 +0.4 823,603 - Psest_0752 0.17 +1.1 823,664 - Psest_0752 0.23 +2.0 823,950 + Psest_0752 0.52 +1.0 823,950 + Psest_0752 0.52 +1.3 823,950 + Psest_0752 0.52 +0.8 823,950 + Psest_0752 0.52 +0.5 823,950 + Psest_0752 0.52 +1.0 823,950 + Psest_0752 0.52 +0.8 823,951 - Psest_0752 0.52 +0.6 823,951 - Psest_0752 0.52 +0.0 823,951 - Psest_0752 0.52 -0.4 823,951 - Psest_0752 0.52 +3.0 823,951 - Psest_0752 0.52 +1.0 823,990 - Psest_0752 0.56 +0.1 824,296 - Psest_0752 0.87 +2.0 824,296 - Psest_0752 0.87 -1.2 824,388 + +0.4 824,388 + -0.6 824,512 + -0.4 824,512 + -1.7 824,513 - +1.6 824,513 - +1.5 824,513 - +0.6 824,513 - +2.2 824,513 - -0.0 824,513 - -1.9 824,699 - +0.1 824,710 + -0.5 824,710 + +0.4 824,710 + -0.9 824,711 - +1.2 824,711 - +1.9 824,739 + -0.4 824,740 - +2.5 824,743 + -0.1 824,744 - -1.1 824,744 - +0.6 824,822 + Psest_0753 0.12 +0.6 824,822 + Psest_0753 0.12 -0.8 824,822 + Psest_0753 0.12 +0.9 824,822 + Psest_0753 0.12 -0.5 824,823 - Psest_0753 0.12 +0.9 824,823 - Psest_0753 0.12 -0.4 824,826 - Psest_0753 0.12 -0.2 824,826 - Psest_0753 0.12 +1.9 824,894 + Psest_0753 0.18 +0.1 824,894 + Psest_0753 0.18 -1.6 824,895 - Psest_0753 0.18 +0.1 825,182 + Psest_0753 0.44 -0.6 825,182 + Psest_0753 0.44 +0.7 825,183 - Psest_0753 0.44 -0.2 825,302 + Psest_0753 0.54 +0.8 825,334 + Psest_0753 0.57 +0.2 825,334 + Psest_0753 0.57 +1.5
Or see this region's nucleotide sequence