Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_688 and HP15_689 are separated by 96 nucleotides HP15_689 and HP15_690 overlap by 8 nucleotides HP15_690 and HP15_691 overlap by 20 nucleotides HP15_691 and HP15_692 are separated by 3 nucleotides HP15_692 and HP15_693 overlap by 7 nucleotides HP15_693 and HP15_694 overlap by 1 nucleotides
HP15_688: HP15_688 - conserved hypothetical protein, at 705,199 to 705,444
_688
HP15_689: HP15_689 - carbon storage regulator, at 705,541 to 705,729
_689
HP15_690: HP15_690 - hypothetical protein, at 705,722 to 706,051
_690
HP15_691: HP15_691 - phage protein-like protein, at 706,032 to 706,253
_691
HP15_692: HP15_692 - phage protein, at 706,257 to 706,877
_692
HP15_693: HP15_693 - hypothetical protein, at 706,871 to 707,218
_693
HP15_694: HP15_694 - conserved hypothetical protein, at 707,218 to 707,478
_694
Position (kb) 706
707 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 705.137 kb on - strand at 705.159 kb on - strand at 705.362 kb on - strand, within HP15_688 at 705.823 kb on - strand, within HP15_690 at 705.823 kb on - strand, within HP15_690 at 705.848 kb on - strand, within HP15_690 at 705.907 kb on - strand, within HP15_690 at 706.144 kb on - strand, within HP15_691 at 706.167 kb on - strand, within HP15_691 at 706.507 kb on - strand, within HP15_692 at 706.658 kb on - strand, within HP15_692 at 706.725 kb on - strand, within HP15_692 at 707.071 kb on - strand, within HP15_693 at 707.121 kb on - strand, within HP15_693 at 707.149 kb on - strand, within HP15_693 at 707.209 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 705,137 - -0.6 705,159 - -1.0 705,362 - HP15_688 0.66 -2.1 705,823 - HP15_690 0.31 +0.2 705,823 - HP15_690 0.31 +0.4 705,848 - HP15_690 0.38 +1.6 705,907 - HP15_690 0.56 -1.3 706,144 - HP15_691 0.50 +1.9 706,167 - HP15_691 0.61 +0.9 706,507 - HP15_692 0.40 +2.4 706,658 - HP15_692 0.65 +1.3 706,725 - HP15_692 0.75 +0.5 707,071 - HP15_693 0.57 -2.5 707,121 - HP15_693 0.72 -3.2 707,149 - HP15_693 0.80 +1.2 707,209 - -0.3
Or see this region's nucleotide sequence