Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_687 and HP15_688 are separated by 410 nucleotides HP15_688 and HP15_689 are separated by 96 nucleotides HP15_689 and HP15_690 overlap by 8 nucleotides HP15_690 and HP15_691 overlap by 20 nucleotides HP15_691 and HP15_692 are separated by 3 nucleotides
HP15_687: HP15_687 - protein containing domain of unknown function DUF1994, at 703,937 to 704,788
_687
HP15_688: HP15_688 - conserved hypothetical protein, at 705,199 to 705,444
_688
HP15_689: HP15_689 - carbon storage regulator, at 705,541 to 705,729
_689
HP15_690: HP15_690 - hypothetical protein, at 705,722 to 706,051
_690
HP15_691: HP15_691 - phage protein-like protein, at 706,032 to 706,253
_691
HP15_692: HP15_692 - phage protein, at 706,257 to 706,877
_692
Position (kb) 705
706 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 704.307 kb on + strand, within HP15_687 at 704.307 kb on + strand, within HP15_687 at 704.315 kb on - strand, within HP15_687 at 704.365 kb on + strand, within HP15_687 at 704.371 kb on - strand, within HP15_687 at 704.378 kb on + strand, within HP15_687 at 704.469 kb on + strand, within HP15_687 at 704.476 kb on - strand, within HP15_687 at 704.635 kb on - strand, within HP15_687 at 704.638 kb on + strand, within HP15_687 at 704.708 kb on - strand at 705.137 kb on - strand at 705.159 kb on - strand at 705.362 kb on - strand, within HP15_688 at 705.823 kb on - strand, within HP15_690 at 705.823 kb on - strand, within HP15_690 at 705.848 kb on - strand, within HP15_690 at 705.907 kb on - strand, within HP15_690 at 706.144 kb on - strand, within HP15_691 at 706.167 kb on - strand, within HP15_691
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 704,307 + HP15_687 0.43 +3.1 704,307 + HP15_687 0.43 +2.2 704,315 - HP15_687 0.44 +4.2 704,365 + HP15_687 0.50 +3.9 704,371 - HP15_687 0.51 +5.4 704,378 + HP15_687 0.52 +1.7 704,469 + HP15_687 0.62 +3.4 704,476 - HP15_687 0.63 +3.7 704,635 - HP15_687 0.82 +3.0 704,638 + HP15_687 0.82 +3.2 704,708 - +4.8 705,137 - -0.6 705,159 - -1.0 705,362 - HP15_688 0.66 -2.1 705,823 - HP15_690 0.31 +0.2 705,823 - HP15_690 0.31 +0.4 705,848 - HP15_690 0.38 +1.6 705,907 - HP15_690 0.56 -1.3 706,144 - HP15_691 0.50 +1.9 706,167 - HP15_691 0.61 +0.9
Or see this region's nucleotide sequence