Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_685 and HP15_686 are separated by 35 nucleotides HP15_686 and HP15_687 are separated by 23 nucleotides
HP15_685: HP15_685 - phage repressor, at 701,983 to 702,966
_685
HP15_686: HP15_686 - conserved hypothetical protein, at 703,002 to 703,913
_686
HP15_687: HP15_687 - protein containing domain of unknown function DUF1994, at 703,937 to 704,788
_687
Position (kb) 701
702
703 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 700.995 kb on + strand at 700.997 kb on + strand at 701.005 kb on + strand at 701.233 kb on + strand at 701.271 kb on + strand at 701.307 kb on + strand at 701.307 kb on + strand at 701.307 kb on + strand at 701.335 kb on + strand at 701.345 kb on + strand at 701.359 kb on + strand at 701.404 kb on + strand at 701.455 kb on + strand at 701.513 kb on + strand at 701.542 kb on + strand at 701.662 kb on + strand at 701.667 kb on + strand at 701.784 kb on + strand at 701.796 kb on + strand at 701.854 kb on + strand at 702.986 kb on + strand at 703.046 kb on - strand at 703.046 kb on - strand at 703.107 kb on + strand, within HP15_686 at 703.147 kb on - strand, within HP15_686 at 703.147 kb on - strand, within HP15_686 at 703.279 kb on - strand, within HP15_686 at 703.286 kb on + strand, within HP15_686 at 703.294 kb on - strand, within HP15_686 at 703.340 kb on - strand, within HP15_686 at 703.344 kb on + strand, within HP15_686 at 703.549 kb on + strand, within HP15_686 at 703.551 kb on - strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.735 kb on + strand, within HP15_686 at 703.743 kb on - strand, within HP15_686
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 700,995 + -0.1 700,997 + +3.7 701,005 + -0.6 701,233 + -1.0 701,271 + -0.4 701,307 + +0.1 701,307 + +1.4 701,307 + +0.5 701,335 + +0.2 701,345 + +3.2 701,359 + +1.7 701,404 + +0.8 701,455 + +0.3 701,513 + +0.6 701,542 + +0.2 701,662 + +0.1 701,667 + -0.7 701,784 + +1.4 701,796 + +1.4 701,854 + +0.0 702,986 + +3.2 703,046 - +3.4 703,046 - +1.0 703,107 + HP15_686 0.12 +3.2 703,147 - HP15_686 0.16 +3.7 703,147 - HP15_686 0.16 +2.3 703,279 - HP15_686 0.30 +4.5 703,286 + HP15_686 0.31 +3.3 703,294 - HP15_686 0.32 +6.2 703,340 - HP15_686 0.37 +5.5 703,344 + HP15_686 0.38 +4.0 703,549 + HP15_686 0.60 +2.5 703,551 - HP15_686 0.60 +6.6 703,735 + HP15_686 0.80 +6.4 703,735 + HP15_686 0.80 +3.4 703,735 + HP15_686 0.80 +2.7 703,735 + HP15_686 0.80 +4.2 703,743 - HP15_686 0.81 +3.4
Or see this region's nucleotide sequence