Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_673 and HP15_674 overlap by 11 nucleotides HP15_674 and HP15_675 are separated by 117 nucleotides HP15_675 and HP15_676 are separated by 11 nucleotides HP15_676 and HP15_677 are separated by 3 nucleotides
HP15_673: HP15_673 - phage terminase GpA, at 692,685 to 694,646
_673
HP15_674: HP15_674 - phage-related packaging protein, at 694,636 to 695,154
_674
HP15_675: HP15_675 - conserved hypothetical protein, at 695,272 to 695,703
_675
HP15_676: HP15_676 - N-acetylmuramoyl-L-alanine amidase, at 695,715 to 696,140
_676
HP15_677: HP15_677 - hypothetical protein, at 696,144 to 696,452
_677
Position (kb) 694
695
696 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 693.654 kb on + strand, within HP15_673 at 693.696 kb on - strand, within HP15_673 at 693.696 kb on - strand, within HP15_673 at 693.905 kb on - strand, within HP15_673 at 693.921 kb on - strand, within HP15_673 at 693.957 kb on - strand, within HP15_673 at 694.022 kb on + strand, within HP15_673 at 694.105 kb on + strand, within HP15_673 at 694.113 kb on - strand, within HP15_673 at 694.113 kb on - strand, within HP15_673 at 694.166 kb on - strand, within HP15_673 at 694.186 kb on + strand, within HP15_673 at 694.219 kb on - strand, within HP15_673 at 694.258 kb on - strand, within HP15_673 at 694.387 kb on + strand, within HP15_673 at 694.405 kb on - strand, within HP15_673 at 694.410 kb on - strand, within HP15_673 at 694.410 kb on - strand, within HP15_673 at 694.410 kb on - strand, within HP15_673 at 694.461 kb on - strand at 694.480 kb on + strand at 694.546 kb on + strand at 694.546 kb on + strand at 694.549 kb on - strand at 694.554 kb on - strand at 694.554 kb on - strand at 694.556 kb on + strand at 694.641 kb on - strand at 694.666 kb on - strand at 694.728 kb on - strand, within HP15_674 at 694.730 kb on + strand, within HP15_674 at 694.745 kb on + strand, within HP15_674 at 694.749 kb on - strand, within HP15_674 at 694.826 kb on + strand, within HP15_674 at 694.834 kb on - strand, within HP15_674 at 694.961 kb on + strand, within HP15_674 at 695.043 kb on - strand, within HP15_674 at 695.123 kb on - strand at 695.128 kb on - strand at 695.143 kb on - strand at 695.167 kb on - strand at 695.227 kb on + strand at 695.233 kb on + strand at 695.233 kb on - strand at 695.250 kb on - strand at 695.271 kb on + strand at 695.320 kb on - strand, within HP15_675 at 695.322 kb on + strand, within HP15_675 at 695.426 kb on - strand, within HP15_675 at 695.532 kb on + strand, within HP15_675 at 695.537 kb on + strand, within HP15_675 at 695.571 kb on - strand, within HP15_675 at 695.603 kb on + strand, within HP15_675 at 695.609 kb on + strand, within HP15_675 at 695.617 kb on - strand, within HP15_675 at 695.659 kb on - strand, within HP15_675 at 695.710 kb on + strand at 695.766 kb on - strand, within HP15_676 at 695.801 kb on + strand, within HP15_676 at 695.860 kb on + strand, within HP15_676 at 695.860 kb on + strand, within HP15_676 at 695.914 kb on - strand, within HP15_676 at 695.957 kb on + strand, within HP15_676 at 695.957 kb on - strand, within HP15_676 at 696.085 kb on + strand, within HP15_676 at 696.092 kb on + strand, within HP15_676
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 693,654 + HP15_673 0.49 +3.2 693,696 - HP15_673 0.52 +3.4 693,696 - HP15_673 0.52 +4.1 693,905 - HP15_673 0.62 +4.6 693,921 - HP15_673 0.63 +3.9 693,957 - HP15_673 0.65 +3.1 694,022 + HP15_673 0.68 +4.2 694,105 + HP15_673 0.72 +3.3 694,113 - HP15_673 0.73 +3.3 694,113 - HP15_673 0.73 +1.1 694,166 - HP15_673 0.75 +4.5 694,186 + HP15_673 0.77 +0.6 694,219 - HP15_673 0.78 +3.3 694,258 - HP15_673 0.80 +3.2 694,387 + HP15_673 0.87 -0.6 694,405 - HP15_673 0.88 +3.2 694,410 - HP15_673 0.88 +4.1 694,410 - HP15_673 0.88 +2.7 694,410 - HP15_673 0.88 +0.4 694,461 - +3.4 694,480 + +2.7 694,546 + +4.8 694,546 + +2.9 694,549 - +2.8 694,554 - +3.8 694,554 - +3.3 694,556 + +2.0 694,641 - +3.6 694,666 - +3.2 694,728 - HP15_674 0.18 +3.3 694,730 + HP15_674 0.18 +2.4 694,745 + HP15_674 0.21 +4.0 694,749 - HP15_674 0.22 -0.6 694,826 + HP15_674 0.37 +3.9 694,834 - HP15_674 0.38 +3.7 694,961 + HP15_674 0.63 +3.2 695,043 - HP15_674 0.78 +4.1 695,123 - +1.1 695,128 - +3.0 695,143 - +3.3 695,167 - +2.3 695,227 + +4.1 695,233 + +2.9 695,233 - +4.8 695,250 - +2.9 695,271 + +4.1 695,320 - HP15_675 0.11 +3.8 695,322 + HP15_675 0.12 +2.1 695,426 - HP15_675 0.36 +5.1 695,532 + HP15_675 0.60 +5.4 695,537 + HP15_675 0.61 +4.9 695,571 - HP15_675 0.69 +4.3 695,603 + HP15_675 0.77 +1.4 695,609 + HP15_675 0.78 +5.8 695,617 - HP15_675 0.80 +4.3 695,659 - HP15_675 0.90 +2.9 695,710 + +4.8 695,766 - HP15_676 0.12 +3.6 695,801 + HP15_676 0.20 +4.0 695,860 + HP15_676 0.34 +4.2 695,860 + HP15_676 0.34 +4.1 695,914 - HP15_676 0.47 +3.8 695,957 + HP15_676 0.57 +4.1 695,957 - HP15_676 0.57 +3.5 696,085 + HP15_676 0.87 +4.3 696,092 + HP15_676 0.88 +5.6
Or see this region's nucleotide sequence