Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_654 and HP15_655 are separated by 90 nucleotides HP15_655 and HP15_656 are separated by 28 nucleotides HP15_656 and HP15_657 are separated by 9 nucleotides
HP15_654: HP15_654 - major tail sheath protein, at 675,391 to 676,908
_654
HP15_655: HP15_655 - phage tail collar domain protein-like protein, at 676,999 to 677,463
_655
HP15_656: HP15_656 - tail fiber assembly protein-like protein, at 677,492 to 677,773
_656
HP15_657: HP15_657 - phage tail fiber protein, at 677,783 to 679,219
_657
Position (kb) 677
678 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6 at 676.520 kb on - strand, within HP15_654 at 676.539 kb on - strand, within HP15_654 at 676.539 kb on - strand, within HP15_654 at 676.544 kb on - strand, within HP15_654 at 676.564 kb on - strand, within HP15_654 at 676.654 kb on + strand, within HP15_654 at 676.662 kb on - strand, within HP15_654 at 676.881 kb on + strand at 676.881 kb on + strand at 676.889 kb on - strand at 676.889 kb on - strand at 676.935 kb on - strand at 677.150 kb on - strand, within HP15_655 at 677.249 kb on - strand, within HP15_655 at 677.249 kb on - strand, within HP15_655 at 677.326 kb on - strand, within HP15_655 at 677.405 kb on - strand, within HP15_655 at 677.434 kb on - strand at 677.439 kb on - strand at 677.498 kb on - strand at 677.545 kb on - strand, within HP15_656 at 677.582 kb on - strand, within HP15_656 at 677.582 kb on - strand, within HP15_656 at 677.733 kb on + strand, within HP15_656 at 677.736 kb on - strand, within HP15_656 at 677.793 kb on + strand at 677.793 kb on + strand at 677.865 kb on - strand at 678.000 kb on + strand, within HP15_657 at 678.040 kb on - strand, within HP15_657 at 678.052 kb on - strand, within HP15_657 at 678.092 kb on + strand, within HP15_657 at 678.130 kb on - strand, within HP15_657 at 678.130 kb on - strand, within HP15_657 at 678.146 kb on - strand, within HP15_657 at 678.201 kb on + strand, within HP15_657 at 678.273 kb on - strand, within HP15_657 at 678.319 kb on - strand, within HP15_657 at 678.333 kb on - strand, within HP15_657 at 678.409 kb on + strand, within HP15_657 at 678.409 kb on - strand, within HP15_657 at 678.466 kb on + strand, within HP15_657 at 678.479 kb on - strand, within HP15_657 at 678.500 kb on + strand, within HP15_657 at 678.505 kb on + strand, within HP15_657 at 678.515 kb on + strand, within HP15_657 at 678.560 kb on - strand, within HP15_657 at 678.624 kb on + strand, within HP15_657 at 678.624 kb on + strand, within HP15_657 at 678.664 kb on + strand, within HP15_657 at 678.664 kb on + strand, within HP15_657
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 676,520 - HP15_654 0.74 +3.3 676,539 - HP15_654 0.76 +3.9 676,539 - HP15_654 0.76 +2.0 676,544 - HP15_654 0.76 +3.1 676,564 - HP15_654 0.77 +3.4 676,654 + HP15_654 0.83 +4.7 676,662 - HP15_654 0.84 +4.3 676,881 + +2.7 676,881 + +2.3 676,889 - +3.5 676,889 - +3.5 676,935 - +3.5 677,150 - HP15_655 0.32 +4.1 677,249 - HP15_655 0.54 +1.2 677,249 - HP15_655 0.54 +2.8 677,326 - HP15_655 0.70 +4.7 677,405 - HP15_655 0.87 +3.9 677,434 - +3.6 677,439 - +4.0 677,498 - +2.6 677,545 - HP15_656 0.19 +4.4 677,582 - HP15_656 0.32 -1.5 677,582 - HP15_656 0.32 +4.5 677,733 + HP15_656 0.85 +3.3 677,736 - HP15_656 0.87 +6.1 677,793 + +4.2 677,793 + +5.1 677,865 - +4.8 678,000 + HP15_657 0.15 +4.5 678,040 - HP15_657 0.18 +5.0 678,052 - HP15_657 0.19 +4.2 678,092 + HP15_657 0.22 +4.6 678,130 - HP15_657 0.24 +4.4 678,130 - HP15_657 0.24 +3.5 678,146 - HP15_657 0.25 +3.1 678,201 + HP15_657 0.29 +4.1 678,273 - HP15_657 0.34 +3.9 678,319 - HP15_657 0.37 +3.5 678,333 - HP15_657 0.38 +5.6 678,409 + HP15_657 0.44 +5.6 678,409 - HP15_657 0.44 +1.8 678,466 + HP15_657 0.48 +3.5 678,479 - HP15_657 0.48 +4.0 678,500 + HP15_657 0.50 +3.3 678,505 + HP15_657 0.50 +1.6 678,515 + HP15_657 0.51 +4.2 678,560 - HP15_657 0.54 +2.3 678,624 + HP15_657 0.59 +3.7 678,624 + HP15_657 0.59 +4.6 678,664 + HP15_657 0.61 +3.5 678,664 + HP15_657 0.61 +3.3
Or see this region's nucleotide sequence