Strain Fitness in Marinobacter adhaerens HP15 around HP15_555

Experiment: m.b. Nalidixic 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_554 and HP15_555 are separated by 705 nucleotidesHP15_555 and HP15_556 overlap by 4 nucleotidesHP15_556 and HP15_557 are separated by 2 nucleotides HP15_554: HP15_554 - tetrapyrrole methylase family protein, at 573,440 to 574,336 _554 HP15_555: HP15_555 - MraZ protein, at 575,042 to 575,494 _555 HP15_556: HP15_556 - S-adenosyl-L-methionine-dependent methyltransferase mraW, at 575,491 to 576,474 _556 HP15_557: HP15_557 - cell division protein, FtsL-like protein, at 576,477 to 576,881 _557 Position (kb) 575 576Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 574.048 kb on - strand, within HP15_554at 574.082 kb on - strand, within HP15_554at 574.213 kb on - strand, within HP15_554at 574.269 kb on + strandat 574.269 kb on + strandat 574.332 kb on + strandat 574.385 kb on - strandat 575.026 kb on + strandat 575.131 kb on + strand, within HP15_555at 575.237 kb on + strand, within HP15_555at 575.404 kb on + strand, within HP15_555at 575.606 kb on + strand, within HP15_556at 576.303 kb on + strand, within HP15_556at 576.403 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml
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574,048 - HP15_554 0.68 +0.9
574,082 - HP15_554 0.72 +1.6
574,213 - HP15_554 0.86 +1.3
574,269 + -4.0
574,269 + -0.2
574,332 + +0.1
574,385 - +0.1
575,026 + -1.0
575,131 + HP15_555 0.20 -1.8
575,237 + HP15_555 0.43 -2.2
575,404 + HP15_555 0.80 -1.4
575,606 + HP15_556 0.12 +0.0
576,303 + HP15_556 0.83 -1.0
576,403 + -0.2

Or see this region's nucleotide sequence