Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4129 and HP15_4130 overlap by 4 nucleotides HP15_4130 and HP15_4131 are separated by 12 nucleotides HP15_4131 and HP15_4132 are separated by 32 nucleotides HP15_4132 and HP15_4133 are separated by 43 nucleotides
HP15_4129: HP15_4129 - molybdopterin-guanine dinucleotide biosynthesis protein B, at 4,365,013 to 4,365,504
_4129
HP15_4130: HP15_4130 - molybdopterin-guanine dinucleotide biosynthesis protein A, at 4,365,501 to 4,366,088
_4130
HP15_4131: HP15_4131 - formate dehydrogenase family accessory protein FdhD, at 4,366,101 to 4,366,970
_4131
HP15_4132: HP15_4132 - hypothetical protein, at 4,367,003 to 4,367,113
_4132
HP15_4133: HP15_4133 - sulfate/tungstate uptake family ABC transporter, periplasmic substrate-binding protein, at 4,367,157 to 4,367,993
_4133
Position (kb) 4366
4367 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4365.148 kb on + strand, within HP15_4129 at 4365.222 kb on + strand, within HP15_4129 at 4365.227 kb on - strand, within HP15_4129 at 4365.270 kb on + strand, within HP15_4129 at 4365.285 kb on - strand, within HP15_4129 at 4365.290 kb on + strand, within HP15_4129 at 4365.353 kb on - strand, within HP15_4129 at 4365.456 kb on + strand at 4365.520 kb on + strand at 4365.528 kb on - strand at 4365.533 kb on - strand at 4365.674 kb on + strand, within HP15_4130 at 4365.682 kb on - strand, within HP15_4130 at 4365.773 kb on + strand, within HP15_4130 at 4365.789 kb on - strand, within HP15_4130 at 4366.106 kb on - strand at 4366.152 kb on - strand at 4366.169 kb on - strand at 4366.190 kb on - strand, within HP15_4131 at 4366.232 kb on + strand, within HP15_4131 at 4366.305 kb on + strand, within HP15_4131 at 4366.306 kb on + strand, within HP15_4131 at 4366.346 kb on + strand, within HP15_4131 at 4366.346 kb on + strand, within HP15_4131 at 4366.354 kb on + strand, within HP15_4131 at 4366.359 kb on - strand, within HP15_4131 at 4366.395 kb on + strand, within HP15_4131 at 4366.465 kb on + strand, within HP15_4131 at 4366.465 kb on + strand, within HP15_4131 at 4366.482 kb on + strand, within HP15_4131 at 4366.483 kb on - strand, within HP15_4131 at 4366.552 kb on + strand, within HP15_4131 at 4366.565 kb on - strand, within HP15_4131 at 4366.575 kb on - strand, within HP15_4131 at 4366.690 kb on - strand, within HP15_4131 at 4366.820 kb on - strand, within HP15_4131 at 4367.027 kb on + strand, within HP15_4132 at 4367.037 kb on - strand, within HP15_4132 at 4367.124 kb on + strand at 4367.132 kb on - strand at 4367.133 kb on + strand at 4367.133 kb on + strand at 4367.133 kb on + strand at 4367.141 kb on - strand at 4367.188 kb on - strand at 4367.348 kb on + strand, within HP15_4133 at 4367.356 kb on - strand, within HP15_4133 at 4367.425 kb on + strand, within HP15_4133 at 4367.446 kb on - strand, within HP15_4133 at 4367.454 kb on - strand, within HP15_4133 at 4367.464 kb on - strand, within HP15_4133 at 4367.520 kb on + strand, within HP15_4133 at 4367.603 kb on - strand, within HP15_4133 at 4367.613 kb on - strand, within HP15_4133 at 4367.624 kb on - strand, within HP15_4133 at 4367.774 kb on - strand, within HP15_4133 at 4367.841 kb on + strand, within HP15_4133 at 4367.858 kb on + strand, within HP15_4133 at 4367.872 kb on - strand, within HP15_4133
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 4,365,148 + HP15_4129 0.27 -0.9 4,365,222 + HP15_4129 0.42 +1.7 4,365,227 - HP15_4129 0.43 +0.7 4,365,270 + HP15_4129 0.52 -1.1 4,365,285 - HP15_4129 0.55 +2.3 4,365,290 + HP15_4129 0.56 -3.0 4,365,353 - HP15_4129 0.69 -0.1 4,365,456 + +0.1 4,365,520 + +0.5 4,365,528 - -0.9 4,365,533 - +4.3 4,365,674 + HP15_4130 0.29 +0.1 4,365,682 - HP15_4130 0.31 -0.9 4,365,773 + HP15_4130 0.46 -1.7 4,365,789 - HP15_4130 0.49 +2.9 4,366,106 - +0.0 4,366,152 - +0.4 4,366,169 - +0.0 4,366,190 - HP15_4131 0.10 -0.0 4,366,232 + HP15_4131 0.15 +1.1 4,366,305 + HP15_4131 0.23 -1.2 4,366,306 + HP15_4131 0.24 -0.4 4,366,346 + HP15_4131 0.28 -0.5 4,366,346 + HP15_4131 0.28 +0.3 4,366,354 + HP15_4131 0.29 +1.0 4,366,359 - HP15_4131 0.30 +2.4 4,366,395 + HP15_4131 0.34 +0.6 4,366,465 + HP15_4131 0.42 -3.3 4,366,465 + HP15_4131 0.42 -0.5 4,366,482 + HP15_4131 0.44 +0.4 4,366,483 - HP15_4131 0.44 +2.4 4,366,552 + HP15_4131 0.52 +0.5 4,366,565 - HP15_4131 0.53 +0.2 4,366,575 - HP15_4131 0.54 +0.5 4,366,690 - HP15_4131 0.68 -1.7 4,366,820 - HP15_4131 0.83 +0.0 4,367,027 + HP15_4132 0.22 -0.7 4,367,037 - HP15_4132 0.31 -0.6 4,367,124 + -0.2 4,367,132 - -0.2 4,367,133 + -0.7 4,367,133 + +0.8 4,367,133 + -0.8 4,367,141 - -0.2 4,367,188 - +0.2 4,367,348 + HP15_4133 0.23 -2.8 4,367,356 - HP15_4133 0.24 +0.1 4,367,425 + HP15_4133 0.32 -0.6 4,367,446 - HP15_4133 0.35 -0.4 4,367,454 - HP15_4133 0.35 +1.1 4,367,464 - HP15_4133 0.37 +0.2 4,367,520 + HP15_4133 0.43 +1.1 4,367,603 - HP15_4133 0.53 -1.1 4,367,613 - HP15_4133 0.54 -2.0 4,367,624 - HP15_4133 0.56 +0.4 4,367,774 - HP15_4133 0.74 -1.3 4,367,841 + HP15_4133 0.82 +0.3 4,367,858 + HP15_4133 0.84 -0.9 4,367,872 - HP15_4133 0.85 +1.1
Or see this region's nucleotide sequence