Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3144

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
3,316,257	+				+0.2
3,316,257	+				+0.4
3,316,258	-				-1.1
3,316,287	+		Psest_3142	0.13	-0.0
3,316,453	+		Psest_3142	0.46	-1.7
3,316,453	+		Psest_3142	0.46	+0.3
3,316,453	+		Psest_3142	0.46	-0.2
3,316,453	+		Psest_3142	0.46	-0.8
3,316,453	+		Psest_3142	0.46	+0.3
3,316,453	+		Psest_3142	0.46	+0.7
3,316,453	+		Psest_3142	0.46	-0.5
3,316,454	-		Psest_3142	0.46	-0.6
3,316,454	-		Psest_3142	0.46	-0.4
3,316,454	-		Psest_3142	0.46	-0.9
3,316,454	-		Psest_3142	0.46	-2.3
3,316,482	+		Psest_3142	0.52	-0.1
3,316,482	+		Psest_3142	0.52	-0.1
3,316,483	-		Psest_3142	0.52	-0.8
3,316,483	-		Psest_3142	0.52	-0.3
3,316,483	-		Psest_3142	0.52	-0.7
3,316,486	+		Psest_3142	0.52	-0.8
3,316,486	+		Psest_3142	0.52	-1.4
3,316,486	+		Psest_3142	0.52	-0.6
3,316,486	+		Psest_3142	0.52	-0.4
3,316,486	+		Psest_3142	0.52	-2.4
3,316,486	+		Psest_3142	0.52	-0.5
3,316,486	+		Psest_3142	0.52	+0.6
3,316,486	+		Psest_3142	0.52	-0.1
3,316,486	+		Psest_3142	0.52	+0.4
3,316,486	+		Psest_3142	0.52	-0.4
3,316,486	+		Psest_3142	0.52	-0.2
3,316,486	+		Psest_3142	0.52	-1.5
3,316,486	+		Psest_3142	0.52	+0.0
3,316,487	-		Psest_3142	0.53	+0.0
3,316,487	-		Psest_3142	0.53	+0.5
3,316,487	-		Psest_3142	0.53	-2.1
3,316,487	-		Psest_3142	0.53	-0.3
3,316,487	-		Psest_3142	0.53	-0.4
3,316,487	-		Psest_3142	0.53	-0.1
3,316,487	-		Psest_3142	0.53	-0.1
3,316,487	-		Psest_3142	0.53	-2.7
3,316,679	+				-0.6
3,316,679	+				+1.2
3,316,680	-				-0.6
3,316,680	-				+0.4
3,316,811	+		Psest_3143	0.11	-1.3
3,316,812	-		Psest_3143	0.11	+1.0
3,316,812	-		Psest_3143	0.11	-0.2
3,316,812	-		Psest_3143	0.11	+0.3
3,316,858	-		Psest_3143	0.25	+0.3
3,316,906	+		Psest_3143	0.41	-0.9
3,316,907	-		Psest_3143	0.41	+1.1
3,316,936	-		Psest_3143	0.50	-0.5
3,316,978	+		Psest_3143	0.63	-1.0
3,317,011	+		Psest_3143	0.74	-0.5
3,317,159	+				-1.4
3,317,246	+				-0.1
3,317,247	-				-1.1
3,317,247	-				+0.2
3,317,464	-		Psest_3144	0.18	-0.8
3,317,464	-		Psest_3144	0.18	-0.3
3,317,464	-		Psest_3144	0.18	-0.5
3,317,470	+		Psest_3144	0.18	-0.1
3,317,557	-		Psest_3144	0.24	+0.2
3,317,832	+		Psest_3144	0.42	-0.1
3,317,833	-		Psest_3144	0.42	-0.8
3,317,833	-		Psest_3144	0.42	-1.2
3,317,833	-		Psest_3144	0.42	-0.0
3,317,833	-		Psest_3144	0.42	-0.0
3,317,839	+		Psest_3144	0.42	+0.2
3,317,839	+		Psest_3144	0.42	+1.1
3,317,839	+		Psest_3144	0.42	+0.1
3,317,839	+		Psest_3144	0.42	-0.1
3,317,839	+		Psest_3144	0.42	+0.1
3,317,839	+		Psest_3144	0.42	-0.2
3,317,839	+		Psest_3144	0.42	+0.4
3,317,839	+		Psest_3144	0.42	+0.5
3,317,840	-		Psest_3144	0.42	-0.4
3,317,840	-		Psest_3144	0.42	-0.0
3,317,840	-		Psest_3144	0.42	-0.9
3,317,840	-		Psest_3144	0.42	-0.7
3,317,840	-		Psest_3144	0.42	-2.3
3,317,840	-		Psest_3144	0.42	+0.3
3,317,840	-		Psest_3144	0.42	+0.8
3,317,855	+		Psest_3144	0.43	-0.6
3,318,018	+		Psest_3144	0.54	-1.1
3,318,018	+		Psest_3144	0.54	-1.2
3,318,018	+		Psest_3144	0.54	-1.0
3,318,018	+		Psest_3144	0.54	-0.6
3,318,018	+		Psest_3144	0.54	-0.5
3,318,018	+		Psest_3144	0.54	-0.5
3,318,019	-		Psest_3144	0.54	-1.1
3,318,019	-		Psest_3144	0.54	-1.4
3,318,019	-		Psest_3144	0.54	-1.0
3,318,019	-		Psest_3144	0.54	-1.1
3,318,019	-		Psest_3144	0.54	-0.1
3,318,019	-		Psest_3144	0.54	+0.1
3,318,019	-		Psest_3144	0.54	-1.5
3,318,040	+		Psest_3144	0.55	-0.5
3,318,040	+		Psest_3144	0.55	-0.3
3,318,040	+		Psest_3144	0.55	-0.3
3,318,040	+		Psest_3144	0.55	-1.9
3,318,040	+		Psest_3144	0.55	-1.6
3,318,040	+		Psest_3144	0.55	+0.2
3,318,041	-		Psest_3144	0.56	-1.3
3,318,041	-		Psest_3144	0.56	-0.8
3,318,041	-		Psest_3144	0.56	-1.1
3,318,041	-		Psest_3144	0.56	-0.0
3,318,396	+		Psest_3144	0.79	-1.7
3,318,396	+		Psest_3144	0.79	+0.5
3,318,396	+		Psest_3144	0.79	-1.0
3,318,396	+		Psest_3144	0.79	-0.6
3,318,396	+		Psest_3144	0.79	-0.7
3,318,396	+		Psest_3144	0.79	-1.8
3,318,397	-		Psest_3144	0.79	+0.3
3,318,397	-		Psest_3144	0.79	-0.0
3,318,397	-		Psest_3144	0.79	-0.3
3,318,397	-		Psest_3144	0.79	+0.2
3,318,397	-		Psest_3144	0.79	-0.3
3,318,398	+		Psest_3144	0.79	-3.1
3,318,398	+		Psest_3144	0.79	+0.2
3,318,398	+		Psest_3144	0.79	+1.2
3,318,398	+		Psest_3144	0.79	-0.1
3,318,398	+		Psest_3144	0.79	-1.6
3,318,398	+		Psest_3144	0.79	-0.9
3,318,398	+		Psest_3144	0.79	-1.3
3,318,398	+		Psest_3144	0.79	-0.3
3,318,399	-		Psest_3144	0.79	-0.4
3,318,399	-		Psest_3144	0.79	+0.5
3,318,400	+		Psest_3144	0.79	-1.4
3,318,400	+		Psest_3144	0.79	-0.2
3,318,400	+		Psest_3144	0.79	-1.0
3,318,400	+		Psest_3144	0.79	-2.0
3,318,400	+		Psest_3144	0.79	-0.3
3,318,400	+		Psest_3144	0.79	-0.2
3,318,400	+		Psest_3144	0.79	-0.1
3,318,400	+		Psest_3144	0.79	-1.0
3,318,400	+		Psest_3144	0.79	-1.5
3,318,400	+		Psest_3144	0.79	-0.6
3,318,400	+		Psest_3144	0.79	+2.3
3,318,401	-		Psest_3144	0.79	-1.1
3,318,401	-		Psest_3144	0.79	-1.7
3,318,401	-		Psest_3144	0.79	-2.5
3,318,401	-		Psest_3144	0.79	-2.0
3,318,401	-		Psest_3144	0.79	-0.1
3,318,401	-		Psest_3144	0.79	-0.7
3,318,401	-		Psest_3144	0.79	+0.3
3,318,502	+		Psest_3144	0.86	-0.2
3,318,503	-		Psest_3144	0.86	+0.2
3,318,610	-				-0.8
3,318,657	-				-0.6
3,318,657	-				-1.5
3,318,657	-				-0.2
3,318,657	-				-0.5
3,318,937	+				-1.1
3,318,937	+				-2.7
3,318,937	+				-0.8
3,318,937	+				+0.1
3,318,937	+				-1.8
3,318,937	+				-0.3
3,318,937	+				-0.4
3,318,937	+				-0.7
3,318,937	+				-0.5
3,318,937	+				-1.2
3,318,938	-				-1.6
3,318,938	-				-2.4
3,318,938	-				+1.3
3,318,938	-				+1.2
3,318,938	-				-0.9
3,318,941	+				+0.1
3,318,942	-				-0.8
3,318,942	-				+0.2
3,318,942	-				-0.8
3,319,010	+				-0.5
3,319,113	-				-2.7
3,319,199	+				+1.9
3,319,264	+				+0.6
3,319,349	+				+0.2
3,319,454	-		Psest_3145	0.36	+0.4
3,319,587	-		Psest_3145	0.83	-1.9
3,319,689	-		Psest_3146	0.27	-0.9