Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25870

Experiment: Fumarate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumarate (C)
2,695,786	+		PGA1_c25860	0.18	-0.8
2,695,795	+		PGA1_c25860	0.18	+2.4
2,695,801	-		PGA1_c25860	0.19	+0.9
2,695,801	-		PGA1_c25860	0.19	+1.8
2,695,803	-		PGA1_c25860	0.19	-1.5
2,695,818	+		PGA1_c25860	0.20	-0.4
2,695,849	+		PGA1_c25860	0.23	+1.4
2,695,854	+		PGA1_c25860	0.23	+0.8
2,695,857	-		PGA1_c25860	0.23	+1.3
2,695,857	-		PGA1_c25860	0.23	+1.1
2,695,857	-		PGA1_c25860	0.23	+0.3
2,695,919	+		PGA1_c25860	0.29	+1.6
2,695,927	-		PGA1_c25860	0.29	+0.4
2,695,947	+		PGA1_c25860	0.31	-2.6
2,695,947	+		PGA1_c25860	0.31	+0.2
2,695,958	+		PGA1_c25860	0.32	-2.7
2,695,972	+		PGA1_c25860	0.33	-0.6
2,695,972	+		PGA1_c25860	0.33	+0.8
2,695,972	+		PGA1_c25860	0.33	-1.6
2,695,980	-		PGA1_c25860	0.34	-1.2
2,695,980	-		PGA1_c25860	0.34	-0.6
2,696,017	+		PGA1_c25860	0.37	-1.2
2,696,082	+		PGA1_c25860	0.42	-0.4
2,696,174	+		PGA1_c25860	0.50	+1.9
2,696,194	-		PGA1_c25860	0.51	-0.6
2,696,195	-		PGA1_c25860	0.51	-1.2
2,696,195	-		PGA1_c25860	0.51	-0.5
2,696,201	+		PGA1_c25860	0.52	-0.0
2,696,321	+		PGA1_c25860	0.62	+0.1
2,696,321	+		PGA1_c25860	0.62	+1.7
2,696,321	+		PGA1_c25860	0.62	+0.2
2,696,329	-		PGA1_c25860	0.62	-0.8
2,696,329	-		PGA1_c25860	0.62	-0.8
2,696,380	+		PGA1_c25860	0.66	+1.0
2,696,388	-		PGA1_c25860	0.67	-3.2
2,696,388	-		PGA1_c25860	0.67	-0.8
2,696,406	-		PGA1_c25860	0.69	+0.6
2,696,430	+		PGA1_c25860	0.71	+1.6
2,696,449	-		PGA1_c25860	0.72	-2.6
2,696,459	+		PGA1_c25860	0.73	+1.2
2,696,459	+		PGA1_c25860	0.73	+0.4
2,696,465	-		PGA1_c25860	0.73	+1.3
2,696,467	-		PGA1_c25860	0.74	+0.1
2,696,483	+		PGA1_c25860	0.75	+0.8
2,696,483	-		PGA1_c25860	0.75	+1.0
2,696,527	+		PGA1_c25860	0.78	-0.3
2,696,535	-		PGA1_c25860	0.79	+1.1
2,696,545	-		PGA1_c25860	0.80	+0.4
2,696,545	-		PGA1_c25860	0.80	-0.7
2,696,572	+		PGA1_c25860	0.82	-1.4
2,696,587	+		PGA1_c25860	0.83	+0.6
2,696,590	-		PGA1_c25860	0.84	+0.9
2,696,615	+		PGA1_c25860	0.86	+0.0
2,696,615	+		PGA1_c25860	0.86	-0.7
2,696,728	+				-0.6
2,696,728	+				+1.9
2,696,728	+				+1.0
2,696,728	+				-2.4
2,696,728	+				+1.8
2,696,728	+				-1.2
2,696,728	+				-2.5
2,696,728	+				-2.6
2,696,731	-				-2.7
2,696,735	-				-1.2
2,696,736	-				+1.0
2,696,736	-				-0.5
2,696,736	-				+1.2
2,696,736	-				-0.7
2,696,736	-				+0.2
2,696,767	+				-0.4
2,696,805	+				-0.0
2,696,813	-				+1.3
2,696,857	-		PGA1_c25870	0.14	+0.3
2,696,875	+		PGA1_c25870	0.17	-1.9
2,696,878	-		PGA1_c25870	0.18	-1.6
2,696,901	-		PGA1_c25870	0.22	+0.3
2,696,927	+		PGA1_c25870	0.27	-1.0
2,696,927	-		PGA1_c25870	0.27	-1.7
2,696,927	-		PGA1_c25870	0.27	-1.2
2,696,932	+		PGA1_c25870	0.28	-1.9
2,696,984	-		PGA1_c25870	0.37	+0.3
2,696,984	-		PGA1_c25870	0.37	-1.9
2,696,991	-		PGA1_c25870	0.39	-2.3
2,697,019	-		PGA1_c25870	0.44	-1.4
2,697,037	-		PGA1_c25870	0.47	-2.6
2,697,039	-		PGA1_c25870	0.48	+0.2
2,697,080	+		PGA1_c25870	0.56	+0.2
2,697,088	-		PGA1_c25870	0.57	+0.5
2,697,098	-		PGA1_c25870	0.59	-3.8
2,697,098	-		PGA1_c25870	0.59	-1.0
2,697,098	-		PGA1_c25870	0.59	-0.4
2,697,112	-		PGA1_c25870	0.62	+0.3
2,697,210	-		PGA1_c25870	0.80	-0.5
2,697,211	-		PGA1_c25870	0.80	+0.4
2,697,251	+		PGA1_c25870	0.88	+1.4
2,697,251	+		PGA1_c25870	0.88	+1.9
2,697,251	+		PGA1_c25870	0.88	-0.3
2,697,251	+		PGA1_c25870	0.88	-0.7
2,697,259	-		PGA1_c25870	0.89	+0.0
2,697,265	+				-1.7
2,697,272	+				+0.1
2,697,280	-				-2.0
2,697,281	-				-0.4
2,697,283	+				-2.5
2,697,283	+				+1.4
2,697,285	+				-2.7
2,697,285	+				-1.8
2,697,285	+				+0.3
2,697,285	+				+0.2
2,697,285	+				-1.6
2,697,285	+				+1.9
2,697,285	+				+0.4
2,697,285	+				+1.7
2,697,285	+				-1.9
2,697,285	+				-0.4
2,697,285	+				+0.8
2,697,285	+				+1.2
2,697,285	+				+1.0
2,697,285	+				+1.1
2,697,285	+				+0.8
2,697,291	-				+0.1
2,697,291	-				+0.7
2,697,293	-				-0.2
2,697,293	-				-0.2
2,697,293	-				+0.0
2,697,293	-				+0.7
2,697,323	+				-2.0
2,697,333	-				-2.4
2,697,333	-				-0.7
2,697,335	-				-3.0
2,697,337	+				+0.3
2,697,337	+				-1.6
2,697,352	+		PGA1_c25880	0.14	-0.6
2,697,361	+		PGA1_c25880	0.17	-1.6
2,697,377	+		PGA1_c25880	0.23	+0.2
2,697,377	+		PGA1_c25880	0.23	+0.6
2,697,377	+		PGA1_c25880	0.23	-2.6
2,697,377	+		PGA1_c25880	0.23	-0.2
2,697,408	+		PGA1_c25880	0.34	-0.9
2,697,426	-		PGA1_c25880	0.40	-0.8
2,697,470	+		PGA1_c25880	0.56	-1.7
2,697,470	+		PGA1_c25880	0.56	-1.7
2,697,470	+		PGA1_c25880	0.56	-1.4
2,697,470	+		PGA1_c25880	0.56	+1.6
2,697,470	+		PGA1_c25880	0.56	+1.2
2,697,470	+		PGA1_c25880	0.56	-2.7
2,697,478	-		PGA1_c25880	0.59	-1.4
2,697,478	-		PGA1_c25880	0.59	+0.3
2,697,478	-		PGA1_c25880	0.59	+0.4
2,697,478	-		PGA1_c25880	0.59	-0.6
2,697,480	+		PGA1_c25880	0.60	+1.1
2,697,486	+		PGA1_c25880	0.62	-2.6
2,697,492	-		PGA1_c25880	0.64	-1.7
2,697,494	-		PGA1_c25880	0.65	+2.0
2,697,507	+		PGA1_c25880	0.69	+1.0
2,697,550	+		PGA1_c25880	0.84	-1.4
2,697,559	-		PGA1_c25880	0.88	+1.4
2,697,567	+				+1.9
2,697,586	-				-0.2
2,697,586	-				-0.1
2,697,637	+				+1.8
2,697,657	+				-0.4
2,697,716	+				-2.4
2,697,730	-				-0.2
2,697,737	-				-2.2
2,697,742	-				+1.6
2,697,749	-				-1.7
2,697,762	+				-2.7
2,697,784	-				+1.6
2,697,819	-				-0.0
2,697,899	+				+1.3
2,697,899	+				+1.4
2,697,899	+				-2.3
2,697,899	+				+1.4
2,697,900	+				-0.1
2,697,907	-				+2.2
2,697,907	-				+2.5
2,697,907	-				-0.9
2,697,907	-				-2.3
2,697,907	-				-1.0
2,697,907	-				+1.1
2,697,909	+				+1.0
2,697,947	-				-0.7
2,697,948	-				+0.7
2,697,949	+				+1.1
2,697,991	+				-0.2
2,698,000	+				-1.2
2,698,008	-				-0.9
2,698,008	-				+0.8
2,698,023	-				+1.0
2,698,028	-				+0.9
2,698,037	-				+0.6
2,698,047	+				+0.6
2,698,062	-				+1.2
2,698,181	-				-0.6
2,698,191	+				+0.2
2,698,217	+				-2.2
2,698,217	+				-0.7
2,698,226	+				+1.2
2,698,226	+				-1.9
2,698,234	-				+1.4
2,698,278	-				-1.5
2,698,293	-				-0.6