Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2482 and HP15_2483 are separated by 22 nucleotides HP15_2483 and HP15_2484 overlap by 4 nucleotides HP15_2484 and HP15_2485 are separated by 26 nucleotides
HP15_2482: HP15_2482 - dethiobiotin synthetase, at 2,623,056 to 2,623,748
_2482
HP15_2483: HP15_2483 - protein containing methyltransferase type 11 domain, at 2,623,771 to 2,624,592
_2483
HP15_2484: HP15_2484 - biotin biosynthesis protein BioH, at 2,624,589 to 2,625,314
_2484
HP15_2485: HP15_2485 - 8-amino-7-oxononanoate synthase, at 2,625,341 to 2,626,516
_2485
Position (kb)
2624
2625
2626 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2623.662 kb on - strand, within HP15_2482 at 2623.776 kb on - strand at 2623.784 kb on - strand at 2623.807 kb on - strand at 2623.807 kb on - strand at 2623.896 kb on - strand, within HP15_2483 at 2623.911 kb on - strand, within HP15_2483 at 2624.110 kb on + strand, within HP15_2483 at 2624.110 kb on + strand, within HP15_2483 at 2624.110 kb on + strand, within HP15_2483 at 2624.185 kb on - strand, within HP15_2483 at 2624.276 kb on - strand, within HP15_2483 at 2624.405 kb on - strand, within HP15_2483 at 2624.425 kb on + strand, within HP15_2483 at 2624.484 kb on + strand, within HP15_2483 at 2624.530 kb on + strand at 2624.532 kb on - strand at 2624.587 kb on + strand at 2624.666 kb on + strand, within HP15_2484 at 2624.771 kb on + strand, within HP15_2484 at 2624.852 kb on + strand, within HP15_2484 at 2624.896 kb on - strand, within HP15_2484 at 2624.923 kb on + strand, within HP15_2484 at 2624.964 kb on - strand, within HP15_2484 at 2624.972 kb on - strand, within HP15_2484 at 2625.066 kb on + strand, within HP15_2484 at 2625.073 kb on + strand, within HP15_2484 at 2625.073 kb on + strand, within HP15_2484 at 2625.081 kb on - strand, within HP15_2484 at 2625.090 kb on + strand, within HP15_2484 at 2625.163 kb on - strand, within HP15_2484 at 2625.166 kb on + strand, within HP15_2484 at 2625.174 kb on - strand, within HP15_2484 at 2625.429 kb on + strand at 2625.494 kb on - strand, within HP15_2485 at 2625.508 kb on + strand, within HP15_2485 at 2625.597 kb on - strand, within HP15_2485 at 2625.665 kb on - strand, within HP15_2485 at 2625.669 kb on - strand, within HP15_2485 at 2625.808 kb on - strand, within HP15_2485 at 2625.810 kb on + strand, within HP15_2485 at 2625.818 kb on - strand, within HP15_2485 at 2625.859 kb on - strand, within HP15_2485 at 2625.893 kb on + strand, within HP15_2485 at 2625.956 kb on + strand, within HP15_2485 at 2626.097 kb on + strand, within HP15_2485 at 2626.102 kb on + strand, within HP15_2485 at 2626.105 kb on - strand, within HP15_2485 at 2626.161 kb on + strand, within HP15_2485 at 2626.310 kb on + strand, within HP15_2485 at 2626.310 kb on + strand, within HP15_2485
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 2,623,662 - HP15_2482 0.87 -1.1 2,623,776 - +1.5 2,623,784 - +0.7 2,623,807 - -2.0 2,623,807 - +0.2 2,623,896 - HP15_2483 0.15 +2.5 2,623,911 - HP15_2483 0.17 +1.0 2,624,110 + HP15_2483 0.41 -3.0 2,624,110 + HP15_2483 0.41 +0.4 2,624,110 + HP15_2483 0.41 -0.7 2,624,185 - HP15_2483 0.50 -3.3 2,624,276 - HP15_2483 0.61 -0.1 2,624,405 - HP15_2483 0.77 +0.5 2,624,425 + HP15_2483 0.80 -1.0 2,624,484 + HP15_2483 0.87 +0.4 2,624,530 + -2.3 2,624,532 - +0.3 2,624,587 + -0.4 2,624,666 + HP15_2484 0.11 +0.1 2,624,771 + HP15_2484 0.25 -0.0 2,624,852 + HP15_2484 0.36 +0.8 2,624,896 - HP15_2484 0.42 +0.5 2,624,923 + HP15_2484 0.46 -3.1 2,624,964 - HP15_2484 0.52 +0.6 2,624,972 - HP15_2484 0.53 -0.6 2,625,066 + HP15_2484 0.66 -1.0 2,625,073 + HP15_2484 0.67 -0.7 2,625,073 + HP15_2484 0.67 +0.5 2,625,081 - HP15_2484 0.68 +0.9 2,625,090 + HP15_2484 0.69 -2.9 2,625,163 - HP15_2484 0.79 +1.2 2,625,166 + HP15_2484 0.79 +0.5 2,625,174 - HP15_2484 0.81 +0.4 2,625,429 + -1.1 2,625,494 - HP15_2485 0.13 +0.2 2,625,508 + HP15_2485 0.14 +1.5 2,625,597 - HP15_2485 0.22 +0.4 2,625,665 - HP15_2485 0.28 -1.3 2,625,669 - HP15_2485 0.28 +0.6 2,625,808 - HP15_2485 0.40 -2.1 2,625,810 + HP15_2485 0.40 -0.5 2,625,818 - HP15_2485 0.41 +0.6 2,625,859 - HP15_2485 0.44 +0.5 2,625,893 + HP15_2485 0.47 -3.2 2,625,956 + HP15_2485 0.52 -0.7 2,626,097 + HP15_2485 0.64 +2.5 2,626,102 + HP15_2485 0.65 +0.2 2,626,105 - HP15_2485 0.65 +0.4 2,626,161 + HP15_2485 0.70 +1.5 2,626,310 + HP15_2485 0.82 -0.3 2,626,310 + HP15_2485 0.82 +0.4
Or see this region's nucleotide sequence