Strain Fitness in Marinobacter adhaerens HP15 around HP15_1876
Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nalidixic 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,981,423 | + | HP15_1875 | 0.39 | -0.2 | |
1,981,467 | + | HP15_1875 | 0.43 | -0.6 | |
1,981,475 | - | HP15_1875 | 0.43 | +2.0 | |
1,981,634 | + | HP15_1875 | 0.57 | +0.4 | |
1,981,834 | + | HP15_1875 | 0.75 | -2.3 | |
1,981,834 | + | HP15_1875 | 0.75 | +0.4 | |
1,981,834 | + | HP15_1875 | 0.75 | -0.1 | |
1,981,842 | - | HP15_1875 | 0.76 | -2.8 | |
1,981,842 | - | HP15_1875 | 0.76 | -0.6 | |
1,981,842 | - | HP15_1875 | 0.76 | +1.4 | |
1,981,946 | - | HP15_1875 | 0.85 | +2.7 | |
1,982,015 | - | -0.0 | |||
1,982,016 | + | -0.9 | |||
1,982,069 | + | +1.8 | |||
1,982,247 | - | +1.6 | |||
1,982,395 | - | HP15_1876 | 0.24 | +0.7 | |
1,982,396 | - | HP15_1876 | 0.24 | +0.7 | |
1,982,486 | + | HP15_1876 | 0.35 | +1.1 | |
1,982,719 | + | HP15_1876 | 0.63 | +0.1 | |
1,983,288 | + | HP15_1877 | 0.67 | -0.6 | |
1,983,709 | - | HP15_1878 | 0.16 | +0.6 | |
1,983,815 | + | HP15_1878 | 0.22 | -0.1 | |
1,983,832 | - | HP15_1878 | 0.23 | -0.8 | |
1,983,869 | + | HP15_1878 | 0.25 | -0.6 | |
1,983,950 | + | HP15_1878 | 0.30 | -0.8 | |
1,983,958 | + | HP15_1878 | 0.30 | +0.0 | |
1,983,966 | - | HP15_1878 | 0.31 | +0.3 | |
1,983,966 | - | HP15_1878 | 0.31 | +0.7 |
Or see this region's nucleotide sequence