Strain Fitness in Marinobacter adhaerens HP15 around HP15_1466

Experiment: m.b. Nalidixic 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1464 and HP15_1465 are separated by 1 nucleotidesHP15_1465 and HP15_1466 are separated by 155 nucleotidesHP15_1466 and HP15_1467 are separated by 217 nucleotidesHP15_1467 and HP15_1468 are separated by 34 nucleotides HP15_1464: HP15_1464 - adenylate/guanylate cyclase, at 1,539,892 to 1,541,331 _1464 HP15_1465: HP15_1465 - conserved hypothetical protein, membrane, at 1,541,333 to 1,541,644 _1465 HP15_1466: HP15_1466 - nitroreductase family protein, at 1,541,800 to 1,542,351 _1466 HP15_1467: HP15_1467 - fFlagellar basal-body rod protein FlgB, at 1,542,569 to 1,542,988 _1467 HP15_1468: HP15_1468 - flagellar basal-body rod protein FlgC-like protein, at 1,543,023 to 1,543,472 _1468 Position (kb) 1541 1542 1543Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1540.850 kb on - strand, within HP15_1464at 1540.959 kb on - strand, within HP15_1464at 1540.973 kb on - strand, within HP15_1464at 1541.106 kb on + strand, within HP15_1464at 1541.124 kb on - strand, within HP15_1464at 1541.124 kb on - strand, within HP15_1464at 1541.147 kb on - strand, within HP15_1464at 1541.209 kb on - strandat 1541.382 kb on + strand, within HP15_1465at 1541.388 kb on + strand, within HP15_1465at 1541.388 kb on + strand, within HP15_1465at 1541.396 kb on - strand, within HP15_1465at 1541.570 kb on + strand, within HP15_1465at 1541.712 kb on + strandat 1541.720 kb on + strandat 1541.842 kb on - strandat 1541.842 kb on - strandat 1541.885 kb on - strand, within HP15_1466at 1541.915 kb on + strand, within HP15_1466at 1541.925 kb on + strand, within HP15_1466at 1541.931 kb on - strand, within HP15_1466at 1542.066 kb on - strand, within HP15_1466at 1542.092 kb on - strand, within HP15_1466at 1542.094 kb on + strand, within HP15_1466at 1542.161 kb on + strand, within HP15_1466at 1542.161 kb on + strand, within HP15_1466at 1542.208 kb on + strand, within HP15_1466at 1542.208 kb on + strand, within HP15_1466at 1542.240 kb on - strand, within HP15_1466at 1542.317 kb on - strandat 1542.403 kb on + strandat 1542.413 kb on + strandat 1542.519 kb on + strandat 1542.546 kb on + strandat 1542.574 kb on - strandat 1542.635 kb on + strand, within HP15_1467at 1542.892 kb on + strand, within HP15_1467at 1542.905 kb on - strand, within HP15_1467at 1542.971 kb on + strandat 1542.995 kb on + strandat 1543.085 kb on + strand, within HP15_1468at 1543.142 kb on + strand, within HP15_1468at 1543.269 kb on - strand, within HP15_1468at 1543.284 kb on + strand, within HP15_1468at 1543.304 kb on + strand, within HP15_1468

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml
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1,540,850 - HP15_1464 0.67 +3.4
1,540,959 - HP15_1464 0.74 +1.4
1,540,973 - HP15_1464 0.75 -0.3
1,541,106 + HP15_1464 0.84 -0.2
1,541,124 - HP15_1464 0.86 -0.6
1,541,124 - HP15_1464 0.86 -0.3
1,541,147 - HP15_1464 0.87 -1.2
1,541,209 - -1.4
1,541,382 + HP15_1465 0.16 -1.9
1,541,388 + HP15_1465 0.18 +0.7
1,541,388 + HP15_1465 0.18 +1.0
1,541,396 - HP15_1465 0.20 +0.8
1,541,570 + HP15_1465 0.76 +1.2
1,541,712 + -1.7
1,541,720 + -0.9
1,541,842 - +0.4
1,541,842 - +0.4
1,541,885 - HP15_1466 0.15 -0.7
1,541,915 + HP15_1466 0.21 +0.7
1,541,925 + HP15_1466 0.23 -1.8
1,541,931 - HP15_1466 0.24 -0.2
1,542,066 - HP15_1466 0.48 +1.4
1,542,092 - HP15_1466 0.53 +0.0
1,542,094 + HP15_1466 0.53 -1.4
1,542,161 + HP15_1466 0.65 -3.0
1,542,161 + HP15_1466 0.65 -0.7
1,542,208 + HP15_1466 0.74 +1.6
1,542,208 + HP15_1466 0.74 -4.0
1,542,240 - HP15_1466 0.80 +0.1
1,542,317 - -1.6
1,542,403 + +1.4
1,542,413 + -2.3
1,542,519 + +1.1
1,542,546 + -0.8
1,542,574 - -0.2
1,542,635 + HP15_1467 0.16 -0.2
1,542,892 + HP15_1467 0.77 -0.4
1,542,905 - HP15_1467 0.80 -0.9
1,542,971 + +0.4
1,542,995 + +1.4
1,543,085 + HP15_1468 0.14 -0.3
1,543,142 + HP15_1468 0.26 -0.6
1,543,269 - HP15_1468 0.55 -1.3
1,543,284 + HP15_1468 0.58 +0.7
1,543,304 + HP15_1468 0.62 -0.6

Or see this region's nucleotide sequence