Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1266 and HP15_1267 are separated by 43 nucleotides HP15_1267 and HP15_1268 are separated by 68 nucleotides HP15_1268 and HP15_1269 are separated by 90 nucleotides
HP15_1266: HP15_1266 - flavodoxin/nitric oxide synthase, at 1,325,669 to 1,326,274
_1266
HP15_1267: HP15_1267 - arsenate reductase, at 1,326,318 to 1,326,671
_1267
HP15_1268: HP15_1268 - thioredoxin, at 1,326,740 to 1,327,207
_1268
HP15_1269: HP15_1269 - DNA polymerase III, alpha subunit, at 1,327,298 to 1,330,735
_1269
Position (kb)
1326
1327
1328 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1325.776 kb on + strand, within HP15_1266 at 1325.783 kb on + strand, within HP15_1266 at 1325.783 kb on + strand, within HP15_1266 at 1325.824 kb on + strand, within HP15_1266 at 1325.836 kb on + strand, within HP15_1266 at 1325.859 kb on - strand, within HP15_1266 at 1325.975 kb on - strand, within HP15_1266 at 1326.219 kb on - strand at 1326.231 kb on - strand at 1326.323 kb on - strand at 1326.443 kb on + strand, within HP15_1267 at 1326.448 kb on + strand, within HP15_1267 at 1326.451 kb on - strand, within HP15_1267 at 1326.451 kb on - strand, within HP15_1267 at 1326.453 kb on + strand, within HP15_1267 at 1326.462 kb on - strand, within HP15_1267 at 1326.532 kb on + strand, within HP15_1267 at 1326.742 kb on + strand at 1326.758 kb on + strand at 1326.776 kb on - strand at 1326.972 kb on + strand, within HP15_1268 at 1327.049 kb on + strand, within HP15_1268 at 1327.071 kb on + strand, within HP15_1268
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 1,325,776 + HP15_1266 0.18 -2.9 1,325,783 + HP15_1266 0.19 -0.3 1,325,783 + HP15_1266 0.19 -0.3 1,325,824 + HP15_1266 0.26 -0.3 1,325,836 + HP15_1266 0.28 -0.9 1,325,859 - HP15_1266 0.31 -3.6 1,325,975 - HP15_1266 0.50 -0.9 1,326,219 - +0.6 1,326,231 - -2.5 1,326,323 - -1.1 1,326,443 + HP15_1267 0.35 +0.6 1,326,448 + HP15_1267 0.37 -0.1 1,326,451 - HP15_1267 0.38 +0.7 1,326,451 - HP15_1267 0.38 -0.2 1,326,453 + HP15_1267 0.38 -1.4 1,326,462 - HP15_1267 0.41 +0.2 1,326,532 + HP15_1267 0.60 +1.0 1,326,742 + +0.5 1,326,758 + +0.4 1,326,776 - -2.4 1,326,972 + HP15_1268 0.50 +0.5 1,327,049 + HP15_1268 0.66 +0.3 1,327,071 + HP15_1268 0.71 +1.5
Or see this region's nucleotide sequence