Strain Fitness in Marinobacter adhaerens HP15 around HP15_109

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
111,683	+		HP15_108	0.15	-1.7
111,698	-		HP15_108	0.16	+0.3
111,706	+		HP15_108	0.17	+0.2
111,825	-		HP15_108	0.28	-1.3
111,831	-		HP15_108	0.28	-1.1
111,838	+		HP15_108	0.29	-3.8
111,862	-		HP15_108	0.31	+0.7
111,878	+		HP15_108	0.32	+0.3
111,911	-		HP15_108	0.35	-1.1
111,935	+		HP15_108	0.38	+0.6
111,985	+		HP15_108	0.42	-2.0
112,003	-		HP15_108	0.44	-1.7
112,008	-		HP15_108	0.44	+1.3
112,011	+		HP15_108	0.45	-1.0
112,024	-		HP15_108	0.46	+0.1
112,024	-		HP15_108	0.46	+0.2
112,028	+		HP15_108	0.46	-2.9
112,028	+		HP15_108	0.46	-0.0
112,028	+		HP15_108	0.46	+0.3
112,083	-		HP15_108	0.51	-0.1
112,093	-		HP15_108	0.52	-1.3
112,151	+		HP15_108	0.57	-2.3
112,175	+		HP15_108	0.59	+1.2
112,249	-		HP15_108	0.66	-0.8
112,360	+		HP15_108	0.76	-0.7
112,378	-		HP15_108	0.78	-0.2
112,480	+		HP15_108	0.87	-0.3
112,488	-		HP15_108	0.88	-1.1
112,547	+				+0.1
112,547	+				+1.8
112,610	-				+0.1
112,649	+				-0.0
112,718	+				+0.1
112,724	-				-0.7
112,770	+				-0.7
112,796	+		HP15_109	0.11	+0.3
112,797	-		HP15_109	0.11	+1.8
112,823	+		HP15_109	0.13	-2.1
112,826	-		HP15_109	0.13	+0.3
112,828	+		HP15_109	0.13	+0.2
112,831	-		HP15_109	0.14	+1.3
112,831	-		HP15_109	0.14	-0.1
112,831	-		HP15_109	0.14	+0.5
112,856	+		HP15_109	0.16	-0.7
112,856	+		HP15_109	0.16	-2.4
112,856	+		HP15_109	0.16	-1.3
112,864	-		HP15_109	0.16	+1.6
112,864	-		HP15_109	0.16	-0.1
112,964	-		HP15_109	0.25	+1.5
113,010	+		HP15_109	0.29	-0.1
113,028	-		HP15_109	0.30	+0.3
113,028	-		HP15_109	0.30	-3.5
113,028	-		HP15_109	0.30	-0.6
113,033	-		HP15_109	0.31	-0.3
113,131	+		HP15_109	0.39	-1.5
113,255	+		HP15_109	0.49	-2.1
113,287	-		HP15_109	0.52	+1.1
113,292	-		HP15_109	0.53	-0.2
113,297	-		HP15_109	0.53	+0.3
113,320	+		HP15_109	0.55	+0.9
113,327	+		HP15_109	0.56	-0.1
113,334	-		HP15_109	0.56	-0.7
113,336	+		HP15_109	0.56	+0.3
113,336	+		HP15_109	0.56	-1.7
113,349	-		HP15_109	0.57	-0.8
113,368	+		HP15_109	0.59	+0.1
113,434	+		HP15_109	0.65	-0.3
113,434	+		HP15_109	0.65	+1.9
113,434	+		HP15_109	0.65	+0.4
113,474	+		HP15_109	0.68	-0.0
113,492	+		HP15_109	0.69	+0.3
113,539	+		HP15_109	0.73	+1.3
113,627	-		HP15_109	0.81	+0.5
113,636	+		HP15_109	0.82	+0.9
113,705	-		HP15_109	0.87	-0.1
113,711	+		HP15_109	0.88	-2.6
113,749	-				+0.3
113,782	+				-0.9
113,803	-				-1.3
113,805	+				+0.7
113,848	+				-0.6
113,848	+				-0.2
113,848	+				-0.6
113,848	+				+0.1
113,856	-				+1.6
113,856	-				+0.3
113,856	-				-1.4
113,856	-				+1.3
113,904	+				+0.7
114,006	+				+1.3
114,009	-				-0.1
114,025	+				-1.6
114,070	+				+1.1
114,179	-		HP15_110	0.10	-1.1
114,212	-		HP15_110	0.11	+0.8
114,248	+		HP15_110	0.12	+0.2
114,274	+		HP15_110	0.13	-0.0
114,292	-		HP15_110	0.14	+0.0
114,348	+		HP15_110	0.15	-0.4
114,348	+		HP15_110	0.15	+1.3
114,348	+		HP15_110	0.15	+0.7
114,374	+		HP15_110	0.16	+0.1
114,374	+		HP15_110	0.16	-0.5
114,374	+		HP15_110	0.16	-0.3
114,374	+		HP15_110	0.16	-0.7
114,374	+		HP15_110	0.16	+0.1
114,374	+		HP15_110	0.16	-0.1
114,374	+		HP15_110	0.16	-1.8
114,374	+		HP15_110	0.16	-2.8
114,374	+		HP15_110	0.16	-1.2
114,382	-		HP15_110	0.17	-2.8
114,382	-		HP15_110	0.17	-0.1
114,382	-		HP15_110	0.17	-1.2
114,382	-		HP15_110	0.17	-0.3
114,382	-		HP15_110	0.17	+2.4
114,405	-		HP15_110	0.17	-1.0
114,421	+		HP15_110	0.18	-0.4
114,437	+		HP15_110	0.18	+1.3
114,445	-		HP15_110	0.19	-0.0
114,478	-		HP15_110	0.20	-1.7
114,554	+		HP15_110	0.22	-1.1
114,575	+		HP15_110	0.23	-2.9
114,591	+		HP15_110	0.23	-0.5
114,629	+		HP15_110	0.24	+0.3
114,629	+		HP15_110	0.24	+1.5
114,629	+		HP15_110	0.24	-0.4
114,637	-		HP15_110	0.25	-1.5
114,637	-		HP15_110	0.25	-0.6
114,637	-		HP15_110	0.25	-0.9
114,637	-		HP15_110	0.25	+1.3
114,637	-		HP15_110	0.25	-0.1
114,677	+		HP15_110	0.26	-0.9
114,682	+		HP15_110	0.26	+0.7
114,706	+		HP15_110	0.27	+0.1
114,706	+		HP15_110	0.27	-0.4
114,711	+		HP15_110	0.27	+3.9
114,714	-		HP15_110	0.27	-0.2
114,714	-		HP15_110	0.27	-1.2
114,716	+		HP15_110	0.27	-0.2
114,724	-		HP15_110	0.28	-2.9
114,724	-		HP15_110	0.28	-0.5
114,805	+		HP15_110	0.30	-0.5
114,851	+		HP15_110	0.32	-0.7