Strain Fitness in Shewanella amazonensis SB2B around Sama_3296

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,915,489	+		Sama_3295	0.28	+0.3
3,915,489	+		Sama_3295	0.28	+0.2
3,915,489	+		Sama_3295	0.28	-0.4
3,915,490	-		Sama_3295	0.28	+0.8
3,915,490	-		Sama_3295	0.28	+0.6
3,915,490	-		Sama_3295	0.28	-0.2
3,915,490	-		Sama_3295	0.28	-0.2
3,915,490	-		Sama_3295	0.28	-0.1
3,915,490	-		Sama_3295	0.28	+0.8
3,915,490	-		Sama_3295	0.28	+0.9
3,915,490	-		Sama_3295	0.28	-0.2
3,915,490	-		Sama_3295	0.28	-1.5
3,915,539	+		Sama_3295	0.33	-1.2
3,915,539	+		Sama_3295	0.33	-0.0
3,915,539	+		Sama_3295	0.33	+1.9
3,915,539	+		Sama_3295	0.33	-0.7
3,915,539	+		Sama_3295	0.33	+0.9
3,915,540	-		Sama_3295	0.33	+0.5
3,915,540	-		Sama_3295	0.33	+0.4
3,915,540	-		Sama_3295	0.33	+0.3
3,915,540	-		Sama_3295	0.33	+0.1
3,915,540	-		Sama_3295	0.33	+0.1
3,915,580	+		Sama_3295	0.36	+0.8
3,915,581	-		Sama_3295	0.36	-0.6
3,915,587	-		Sama_3295	0.37	-0.6
3,915,710	+		Sama_3295	0.48	-0.0
3,915,710	+		Sama_3295	0.48	-1.3
3,915,710	+		Sama_3295	0.48	-0.8
3,915,711	-		Sama_3295	0.48	+1.5
3,915,711	-		Sama_3295	0.48	+1.3
3,915,711	-		Sama_3295	0.48	+1.0
3,915,711	-		Sama_3295	0.48	+0.9
3,915,711	-		Sama_3295	0.48	-0.6
3,915,711	-		Sama_3295	0.48	-0.1
3,915,711	-		Sama_3295	0.48	-1.2
3,915,724	+		Sama_3295	0.49	+1.3
3,915,725	-		Sama_3295	0.49	+2.5
3,915,756	+		Sama_3295	0.52	+3.0
3,915,757	-		Sama_3295	0.52	+0.9
3,915,757	-		Sama_3295	0.52	-1.4
3,915,870	+		Sama_3295	0.62	-0.1
3,915,871	-		Sama_3295	0.62	+0.1
3,915,908	+		Sama_3295	0.65	-0.6
3,915,908	+		Sama_3295	0.65	-0.2
3,915,908	+		Sama_3295	0.65	+1.3
3,915,908	+		Sama_3295	0.65	-1.5
3,915,909	-		Sama_3295	0.65	-0.0
3,915,965	-		Sama_3295	0.70	+0.2
3,916,027	+		Sama_3295	0.75	+1.0
3,916,074	+		Sama_3295	0.80	+0.6
3,916,074	+		Sama_3295	0.80	-0.5
3,916,074	+		Sama_3295	0.80	+0.5
3,916,075	-		Sama_3295	0.80	-0.5
3,916,075	-		Sama_3295	0.80	+1.7
3,916,075	-		Sama_3295	0.80	+0.5
3,916,102	-		Sama_3295	0.82	+0.2
3,916,102	-		Sama_3295	0.82	+3.6
3,916,130	-		Sama_3295	0.85	+1.4
3,916,170	-		Sama_3295	0.88	+1.3
3,916,170	-		Sama_3295	0.88	-0.1
3,916,170	-		Sama_3295	0.88	-0.0
3,916,170	-		Sama_3295	0.88	+0.4
3,916,170	-		Sama_3295	0.88	+0.6
3,916,175	+		Sama_3295	0.88	+0.4
3,916,175	+		Sama_3295	0.88	+1.4
3,916,175	+		Sama_3295	0.88	+0.5
3,916,175	+		Sama_3295	0.88	+0.3
3,916,175	+		Sama_3295	0.88	+0.3
3,916,175	+		Sama_3295	0.88	+0.0
3,916,175	+		Sama_3295	0.88	+0.3
3,916,176	-		Sama_3295	0.89	-0.8
3,916,176	-		Sama_3295	0.89	+0.3
3,916,176	-		Sama_3295	0.89	+2.2
3,916,255	+				-0.9
3,916,255	+				-0.3
3,916,255	+				-0.0
3,916,256	-				+1.1
3,916,307	-				-2.0
3,916,447	-				+1.1
3,916,524	+				-1.2
3,916,578	+				-1.5
3,916,578	+				+0.1
3,916,859	-		Sama_3296	0.18	-1.3
3,917,321	+		Sama_3296	0.35	-0.2
3,917,322	-		Sama_3296	0.35	-2.3
3,917,322	-		Sama_3296	0.35	+0.5
3,917,444	+		Sama_3296	0.40	+0.1
3,917,455	-		Sama_3296	0.41	-1.1
3,917,549	-		Sama_3296	0.44	-2.3
3,917,623	+		Sama_3296	0.47	-1.1
3,917,822	-		Sama_3296	0.55	-1.5
3,917,892	-		Sama_3296	0.57	-0.7
3,917,946	-		Sama_3296	0.60	-0.9
3,918,043	-		Sama_3296	0.63	-0.2
3,918,149	+		Sama_3296	0.67	+0.5
3,918,150	-		Sama_3296	0.67	+0.1
3,918,150	-		Sama_3296	0.67	-0.7
3,918,224	+		Sama_3296	0.70	-0.9
3,918,225	-		Sama_3296	0.70	-0.9
3,918,225	-		Sama_3296	0.70	-1.1
3,918,225	-		Sama_3296	0.70	-1.6
3,918,225	-		Sama_3296	0.70	-0.5
3,918,277	-		Sama_3296	0.72	+0.1
3,918,409	+		Sama_3296	0.77	-0.2
3,918,416	+		Sama_3296	0.78	+0.1
3,918,417	-		Sama_3296	0.78	-1.1
3,918,417	-		Sama_3296	0.78	-0.2
3,918,417	-		Sama_3296	0.78	-0.9
3,918,417	-		Sama_3296	0.78	-1.3
3,918,555	+		Sama_3296	0.83	+1.1
3,918,584	+		Sama_3296	0.84	+0.5
3,918,585	-		Sama_3296	0.84	-1.9
3,918,585	-		Sama_3296	0.84	-1.5
3,918,612	+		Sama_3296	0.85	-0.2
3,918,612	+		Sama_3296	0.85	+0.1
3,918,613	-		Sama_3296	0.85	+0.1
3,918,629	+		Sama_3296	0.86	-0.5
3,918,795	+				-0.5
3,918,796	-				-0.7
3,918,850	-				-0.9
3,918,850	-				-0.2
3,918,850	-				+0.1
3,918,850	-				-0.2
3,918,935	+				-1.6
3,918,935	+				-1.1
3,918,936	-				-1.7
3,918,989	+				+0.5
3,918,989	+				+0.2
3,919,080	-				-0.7
3,919,094	+				+1.7
3,919,144	+				+0.6
3,919,190	+				+0.4
3,919,190	+				-0.5
3,919,191	-				-0.0
3,919,191	-				-0.2
3,919,191	-				+0.3
3,919,191	-				-0.3
3,919,194	+				+0.5
3,919,194	+				-0.7
3,919,194	+				-0.2
3,919,194	+				-0.5
3,919,194	+				+0.5
3,919,194	+				-0.7
3,919,194	+				-0.3
3,919,194	+				-0.1
3,919,194	+				-1.5
3,919,194	+				-0.0
3,919,194	+				-0.8
3,919,194	+				-1.5
3,919,194	+				+0.4
3,919,194	+				+0.9
3,919,195	-				-2.2
3,919,195	-				+0.9
3,919,195	-				-0.6
3,919,195	-				+0.4
3,919,195	-				+2.1
3,919,195	-				-1.0
3,919,195	-				-0.2
3,919,195	-				+0.1
3,919,195	-				-0.8
3,919,195	-				-0.6
3,919,195	-				-0.6
3,919,195	-				+3.1
3,919,195	-				+0.1
3,919,195	-				-0.5
3,919,195	-				+0.9
3,919,195	-				-0.1
3,919,195	-				+2.4
3,919,195	-				+1.7
3,919,196	+				+0.1
3,919,196	+				+1.0
3,919,196	+				+0.0
3,919,351	+				-0.4
3,919,351	+				-0.2
3,919,360	+				-2.1
3,919,361	-				-1.5
3,919,388	+				-1.2
3,919,388	+				-0.2
3,919,388	+				+0.1
3,919,389	-				-1.9
3,919,389	-				-1.2
3,919,389	-				+0.1
3,919,389	-				-1.1
3,919,390	+				-1.1
3,919,390	+				-1.6
3,919,391	-				-0.5
3,919,577	-		Sama_3297	0.19	-1.1
3,919,577	-		Sama_3297	0.19	+0.5
3,919,607	+		Sama_3297	0.21	+0.1
3,919,613	+		Sama_3297	0.22	-0.5
3,919,777	+		Sama_3297	0.35	-0.7
3,919,959	+		Sama_3297	0.51	-0.7