Strain Fitness in Shewanella amazonensis SB2B around Sama_2413

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
2,898,924	+				-1.0
2,898,958	+				-0.1
2,898,958	+				+1.0
2,898,958	+				-0.2
2,898,959	-				-0.8
2,898,959	-				-1.1
2,898,963	+				-0.9
2,898,963	+				+1.1
2,898,964	-				-1.3
2,898,964	-				+3.5
2,898,964	-				-0.4
2,898,964	-				+0.1
2,898,994	+				+1.8
2,898,994	+				-0.6
2,898,994	+				-0.8
2,898,994	+				+0.6
2,898,995	-				+2.8
2,898,995	-				-0.7
2,898,995	-				-0.0
2,898,995	-				+0.4
2,898,995	-				-0.5
2,898,995	-				-1.4
2,898,995	-				-0.1
2,899,092	-				+0.5
2,899,105	+				-1.1
2,899,105	+				-0.6
2,899,178	-				+0.1
2,899,178	-				+0.7
2,899,763	+				-0.8
2,899,776	+				-0.8
2,899,832	+				+1.7
2,899,883	+				-0.2
2,899,884	-				-2.8
2,899,890	+				-1.5
2,899,890	+				-0.7
2,899,890	+				-0.4
2,899,890	+				+1.6
2,899,891	-				-1.1
2,899,891	-				-0.0
2,899,891	-				+0.4
2,899,891	-				+1.6
2,899,891	-				+0.2
2,899,979	+				-1.5
2,899,979	+				+0.3
2,900,013	-				+0.5
2,900,018	+				-0.7
2,900,019	-				+0.0
2,900,019	-				+0.7
2,900,058	+		Sama_2413	0.11	-0.9
2,900,059	-		Sama_2413	0.11	-1.1
2,900,066	-		Sama_2413	0.11	-0.1
2,900,174	+		Sama_2413	0.18	+0.0
2,900,174	+		Sama_2413	0.18	-1.8
2,900,275	-		Sama_2413	0.25	-1.5
2,900,294	+		Sama_2413	0.26	-1.2
2,900,295	-		Sama_2413	0.26	-0.1
2,900,316	+		Sama_2413	0.27	+0.9
2,900,316	+		Sama_2413	0.27	-1.0
2,900,317	-		Sama_2413	0.27	-1.5
2,900,317	-		Sama_2413	0.27	-0.6
2,900,317	-		Sama_2413	0.27	+0.9
2,900,318	+		Sama_2413	0.27	-0.7
2,900,318	+		Sama_2413	0.27	+2.4
2,900,318	+		Sama_2413	0.27	+0.9
2,900,318	+		Sama_2413	0.27	+1.0
2,900,318	+		Sama_2413	0.27	+1.1
2,900,318	+		Sama_2413	0.27	+0.1
2,900,318	+		Sama_2413	0.27	-0.3
2,900,319	-		Sama_2413	0.27	+0.6
2,900,319	-		Sama_2413	0.27	-0.3
2,900,319	-		Sama_2413	0.27	+0.5
2,900,319	-		Sama_2413	0.27	-0.8
2,900,359	+		Sama_2413	0.30	+0.7
2,900,359	+		Sama_2413	0.30	+2.8
2,900,359	+		Sama_2413	0.30	+1.5
2,900,360	-		Sama_2413	0.30	+1.2
2,900,360	-		Sama_2413	0.30	-0.3
2,900,360	-		Sama_2413	0.30	-0.8
2,900,379	+		Sama_2413	0.31	-0.1
2,900,379	+		Sama_2413	0.31	-0.4
2,900,380	-		Sama_2413	0.31	-0.3
2,900,424	+		Sama_2413	0.34	+1.3
2,900,424	+		Sama_2413	0.34	-2.8
2,900,424	+		Sama_2413	0.34	-0.0
2,900,472	-		Sama_2413	0.37	+1.0
2,900,602	-		Sama_2413	0.45	+1.5
2,900,666	+		Sama_2413	0.49	+0.5
2,900,666	+		Sama_2413	0.49	+1.3
2,900,666	+		Sama_2413	0.49	-1.2
2,900,667	-		Sama_2413	0.49	-0.8
2,900,667	-		Sama_2413	0.49	-1.3
2,900,667	-		Sama_2413	0.49	-0.8
2,900,667	-		Sama_2413	0.49	+0.7
2,900,667	-		Sama_2413	0.49	+0.1
2,900,725	+		Sama_2413	0.53	+1.3
2,900,725	+		Sama_2413	0.53	-0.1
2,900,726	-		Sama_2413	0.53	+1.0
2,900,775	+		Sama_2413	0.56	-0.5
2,900,796	+		Sama_2413	0.58	-0.1
2,900,797	-		Sama_2413	0.58	-0.3
2,900,797	-		Sama_2413	0.58	-0.1
2,900,797	-		Sama_2413	0.58	+1.1
2,900,858	+		Sama_2413	0.62	+0.2
2,900,858	+		Sama_2413	0.62	+0.1
2,900,858	+		Sama_2413	0.62	-0.3
2,900,886	+		Sama_2413	0.63	-1.4
2,900,886	+		Sama_2413	0.63	-1.2
2,900,887	-		Sama_2413	0.63	+2.4
2,900,887	-		Sama_2413	0.63	+1.0
2,900,887	-		Sama_2413	0.63	-0.2
2,900,887	-		Sama_2413	0.63	-1.4
2,900,887	-		Sama_2413	0.63	-0.6
2,900,892	+		Sama_2413	0.64	+0.4
2,900,893	-		Sama_2413	0.64	+0.0
2,900,893	-		Sama_2413	0.64	+1.4
2,900,927	-		Sama_2413	0.66	+1.1
2,900,944	-		Sama_2413	0.67	+1.2
2,900,957	-		Sama_2413	0.68	-0.0
2,901,023	+		Sama_2413	0.72	-0.7
2,901,023	+		Sama_2413	0.72	-0.2
2,901,023	+		Sama_2413	0.72	+2.0
2,901,023	+		Sama_2413	0.72	+0.8
2,901,023	+		Sama_2413	0.72	+0.4
2,901,023	+		Sama_2413	0.72	+0.7
2,901,023	+		Sama_2413	0.72	-0.6
2,901,023	+		Sama_2413	0.72	-0.0
2,901,023	+		Sama_2413	0.72	+2.6
2,901,023	+		Sama_2413	0.72	+0.2
2,901,023	+		Sama_2413	0.72	-0.2
2,901,023	+		Sama_2413	0.72	+1.0
2,901,023	+		Sama_2413	0.72	+0.1
2,901,024	-		Sama_2413	0.72	-1.5
2,901,024	-		Sama_2413	0.72	+0.0
2,901,024	-		Sama_2413	0.72	+0.0
2,901,024	-		Sama_2413	0.72	+0.2
2,901,024	-		Sama_2413	0.72	+0.8
2,901,024	-		Sama_2413	0.72	+1.9
2,901,024	-		Sama_2413	0.72	-0.5
2,901,024	-		Sama_2413	0.72	+2.1
2,901,024	-		Sama_2413	0.72	+0.3
2,901,024	-		Sama_2413	0.72	+0.5
2,901,082	+		Sama_2413	0.76	+1.1
2,901,082	+		Sama_2413	0.76	-0.0
2,901,082	+		Sama_2413	0.76	-0.4
2,901,082	+		Sama_2413	0.76	+4.3
2,901,083	-		Sama_2413	0.76	+2.8
2,901,083	-		Sama_2413	0.76	+0.7
2,901,111	+		Sama_2413	0.78	+1.9
2,901,111	+		Sama_2413	0.78	+0.1
2,901,111	+		Sama_2413	0.78	-0.7
2,901,111	+		Sama_2413	0.78	+0.4
2,901,112	-		Sama_2413	0.78	-0.8
2,901,112	-		Sama_2413	0.78	+0.2
2,901,112	-		Sama_2413	0.78	+3.6
2,901,112	-		Sama_2413	0.78	+0.2
2,901,112	-		Sama_2413	0.78	+0.2
2,901,112	-		Sama_2413	0.78	-0.0
2,901,114	+		Sama_2413	0.78	-0.2
2,901,142	+		Sama_2413	0.80	-0.5
2,901,143	-		Sama_2413	0.80	+0.8
2,901,159	-		Sama_2413	0.81	-1.1
2,901,214	-		Sama_2413	0.84	-0.1
2,901,238	+		Sama_2413	0.86	-0.1
2,901,239	-		Sama_2413	0.86	+0.7
2,901,351	+				+0.2
2,901,409	+				+0.6
2,901,409	+				-1.9
2,901,409	+				-2.3
2,901,410	-				+0.3
2,901,421	+				-2.2
2,901,421	+				+3.8
2,901,546	+				+0.1
2,901,546	+				+0.2
2,901,546	+				-0.6
2,901,547	-				+1.0
2,901,547	-				-1.6
2,901,547	-				-1.0
2,901,547	-				+2.2
2,901,547	-				-0.2
2,901,547	-				-1.5
2,901,547	-				+0.3
2,901,547	-				+0.7
2,901,547	-				-0.7
2,901,548	+				+1.6
2,901,549	-				-0.3
2,901,549	-				-0.3
2,901,549	-				+0.2
2,901,549	-				-0.9
2,901,558	+				-0.3
2,901,558	+				-1.0
2,901,559	-				-0.6
2,901,559	-				-0.2
2,901,560	+				+1.4
2,901,561	-				+2.7
2,901,561	-				-1.0
2,901,606	+				-0.8
2,901,606	+				+0.5
2,901,642	+				+1.1
2,901,643	-				-2.8
2,901,643	-				-1.2
2,901,658	-				-2.4
2,901,673	+				-0.3
2,901,673	+				+3.2
2,901,673	+				-0.8
2,901,674	-				-1.0
2,901,676	+				-0.4
2,901,677	-				-1.7
2,901,695	+				+0.3
2,901,695	+				-0.4
2,901,695	+				-1.0
2,901,695	+				-0.5
2,901,695	+				+1.2
2,901,696	-				-1.5
2,901,696	-				-1.6
2,901,696	-				-0.2
2,901,696	-				+2.2
2,901,696	-				+0.6
2,901,696	-				-0.7
2,901,696	-				-0.6
2,901,696	-				-0.2
2,901,718	+				-0.3
2,901,719	-				-2.6
2,901,719	-				-1.4
2,901,719	-				-0.2
2,901,750	+				+1.3
2,901,779	-				-0.2
2,901,833	-				+0.0
2,901,859	+				+0.6
2,901,860	-				-1.8
2,901,860	-				-1.4
2,901,868	+				-0.0
2,901,992	+		Sama_2414	0.27	-0.9
2,901,993	-		Sama_2414	0.28	+0.2
2,901,993	-		Sama_2414	0.28	+0.7
2,902,057	+		Sama_2414	0.42	-1.1
2,902,057	+		Sama_2414	0.42	+0.0
2,902,057	+		Sama_2414	0.42	-2.1
2,902,057	+		Sama_2414	0.42	+2.8
2,902,058	-		Sama_2414	0.42	-1.3
2,902,058	-		Sama_2414	0.42	-1.5
2,902,058	-		Sama_2414	0.42	+1.0
2,902,088	-		Sama_2414	0.49	-0.0
2,902,088	-		Sama_2414	0.49	+0.5
2,902,109	+		Sama_2414	0.54	+0.2
2,902,110	-		Sama_2414	0.54	+0.2
2,902,169	+		Sama_2414	0.68	-1.0
2,902,169	+		Sama_2414	0.68	-1.2
2,902,169	+		Sama_2414	0.68	+1.0
2,902,169	+		Sama_2414	0.68	-0.8
2,902,169	+		Sama_2414	0.68	-0.1
2,902,169	+		Sama_2414	0.68	-0.2
2,902,169	+		Sama_2414	0.68	+0.7
2,902,169	+		Sama_2414	0.68	-0.5
2,902,169	+		Sama_2414	0.68	-0.4
2,902,169	+		Sama_2414	0.68	+1.1
2,902,170	-		Sama_2414	0.68	-1.5
2,902,170	-		Sama_2414	0.68	+0.1
2,902,170	-		Sama_2414	0.68	-0.6
2,902,170	-		Sama_2414	0.68	-0.6
2,902,170	-		Sama_2414	0.68	-1.0
2,902,170	-		Sama_2414	0.68	+1.7
2,902,170	-		Sama_2414	0.68	+3.4
2,902,170	-		Sama_2414	0.68	-0.5
2,902,170	+		Sama_2414	0.68	-1.8
2,902,170	-		Sama_2414	0.68	-1.2
2,902,170	-		Sama_2414	0.68	-0.8
2,902,170	-		Sama_2414	0.68	+0.3
2,902,170	-		Sama_2414	0.68	+2.3
2,902,170	-		Sama_2414	0.68	+0.4
2,902,171	+		Sama_2414	0.68	-0.0
2,902,171	+		Sama_2414	0.68	+0.9
2,902,172	-		Sama_2414	0.68	-0.8
2,902,172	-		Sama_2414	0.68	+0.4
2,902,172	-		Sama_2414	0.68	+0.8
2,902,198	+		Sama_2414	0.74	-0.0
2,902,198	+		Sama_2414	0.74	+0.2
2,902,215	+		Sama_2414	0.78	+0.7
2,902,215	+		Sama_2414	0.78	+1.5
2,902,215	+		Sama_2414	0.78	-0.7
2,902,215	+		Sama_2414	0.78	+0.4
2,902,216	-		Sama_2414	0.79	+0.2
2,902,267	+				-0.7
2,902,307	+				+2.2
2,902,307	+				-0.1
2,902,308	-				+0.5
2,902,318	-				-2.2
2,902,345	+				-0.8
2,902,345	+				+1.1
2,902,346	-				-0.5
2,902,346	-				-1.3
2,902,346	-				-1.7
2,902,346	-				-0.3
2,902,346	-				+0.6
2,902,346	-				+0.1
2,902,419	-				-2.5