Strain Fitness in Shewanella amazonensis SB2B around Sama_1274

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
1,562,120	+				+0.2
1,562,139	-				-0.8
1,562,204	-				-1.0
1,562,212	+				-1.0
1,562,212	+				-0.0
1,562,212	+				-1.0
1,562,296	+				-0.1
1,562,296	+				+2.6
1,562,296	+				-0.0
1,562,297	-				-1.6
1,562,297	-				+0.9
1,562,338	+				+1.7
1,562,339	-				+0.1
1,562,339	-				+0.8
1,562,378	-				-0.1
1,562,418	+				-3.3
1,562,422	+				-0.3
1,562,422	+				-1.3
1,562,422	+				-0.4
1,562,422	+				+0.7
1,562,423	-				+3.0
1,562,423	-				-1.5
1,562,423	-				+0.3
1,562,423	-				+0.4
1,562,423	-				-0.5
1,562,423	-				-1.3
1,562,426	+				+0.4
1,562,427	-				+0.2
1,562,427	-				+0.4
1,562,427	-				+0.2
1,562,442	+				+1.4
1,562,442	+				+0.5
1,562,442	+				-2.3
1,562,493	+				-0.5
1,562,494	-				-0.4
1,562,495	+				+2.5
1,562,496	-				-0.7
1,562,536	+				+2.0
1,562,537	-				-0.3
1,562,537	-				-0.4
1,562,583	+				+0.1
1,562,583	+				+1.2
1,562,686	+		Sama_1274	0.16	-1.1
1,562,686	+		Sama_1274	0.16	-0.8
1,562,686	+		Sama_1274	0.16	+0.1
1,562,686	+		Sama_1274	0.16	-0.2
1,562,686	+		Sama_1274	0.16	-0.5
1,562,686	+		Sama_1274	0.16	+0.0
1,562,687	-		Sama_1274	0.16	-1.3
1,562,687	-		Sama_1274	0.16	+1.2
1,562,687	-		Sama_1274	0.16	+0.8
1,562,687	-		Sama_1274	0.16	-0.2
1,562,687	-		Sama_1274	0.16	+1.6
1,562,765	+		Sama_1274	0.24	+1.3
1,562,765	+		Sama_1274	0.24	-1.9
1,562,765	+		Sama_1274	0.24	+0.2
1,562,765	+		Sama_1274	0.24	-0.9
1,562,766	-		Sama_1274	0.24	+0.4
1,562,766	-		Sama_1274	0.24	+0.4
1,562,813	+		Sama_1274	0.29	+0.2
1,562,813	+		Sama_1274	0.29	-0.0
1,562,865	+		Sama_1274	0.35	+0.9
1,562,887	+		Sama_1274	0.37	-0.4
1,562,887	+		Sama_1274	0.37	-0.7
1,562,887	+		Sama_1274	0.37	+1.3
1,562,887	+		Sama_1274	0.37	-0.2
1,562,887	+		Sama_1274	0.37	+1.2
1,562,888	-		Sama_1274	0.37	+1.1
1,562,888	-		Sama_1274	0.37	-1.0
1,562,888	-		Sama_1274	0.37	+0.1
1,562,963	+		Sama_1274	0.45	-0.0
1,562,964	-		Sama_1274	0.45	+0.5
1,563,000	-		Sama_1274	0.49	+0.2
1,563,011	+		Sama_1274	0.50	+0.9
1,563,012	-		Sama_1274	0.51	+1.5
1,563,012	-		Sama_1274	0.51	+0.4
1,563,015	+		Sama_1274	0.51	-1.1
1,563,015	+		Sama_1274	0.51	+1.3
1,563,015	+		Sama_1274	0.51	-0.4
1,563,015	+		Sama_1274	0.51	-0.0
1,563,016	-		Sama_1274	0.51	+1.0
1,563,016	-		Sama_1274	0.51	-0.4
1,563,023	+		Sama_1274	0.52	+2.1
1,563,023	+		Sama_1274	0.52	+0.5
1,563,023	+		Sama_1274	0.52	+1.0
1,563,100	-		Sama_1274	0.60	+2.5
1,563,214	+		Sama_1274	0.72	-1.2
1,563,215	-		Sama_1274	0.72	+1.2
1,563,216	+		Sama_1274	0.72	+0.2
1,563,216	+		Sama_1274	0.72	-0.0
1,563,217	-		Sama_1274	0.72	-0.3
1,563,300	-		Sama_1274	0.81	-1.8
1,563,300	-		Sama_1274	0.81	+0.6
1,563,315	+		Sama_1274	0.83	-0.1
1,563,315	+		Sama_1274	0.83	+0.4
1,563,315	+		Sama_1274	0.83	-0.3
1,563,315	+		Sama_1274	0.83	+0.9
1,563,315	+		Sama_1274	0.83	+0.2
1,563,315	+		Sama_1274	0.83	-1.4
1,563,316	-		Sama_1274	0.83	-0.5
1,563,316	-		Sama_1274	0.83	-0.5
1,563,316	-		Sama_1274	0.83	-1.5
1,563,377	+		Sama_1274	0.90	+1.9
1,563,377	+		Sama_1274	0.90	-0.8
1,563,377	+		Sama_1274	0.90	-0.1
1,563,377	+		Sama_1274	0.90	+0.4
1,563,378	-		Sama_1274	0.90	-2.5
1,563,413	+				-0.4
1,563,413	+				+0.3
1,563,413	+				+1.7
1,563,413	+				-0.2
1,563,414	-				+0.2
1,563,414	-				-1.3
1,563,414	-				+0.1
1,563,414	-				+2.0
1,563,414	-				-0.2
1,563,414	-				-0.2
1,563,424	+				+0.4
1,563,424	+				-2.1
1,563,425	-				-0.9
1,563,491	+				-0.2
1,563,492	-				+1.9
1,563,570	+				-0.3
1,563,570	+				-0.9
1,563,643	-				+0.2
1,563,662	-				-1.3
1,563,672	+				+0.0
1,563,673	-				-0.6
1,563,673	-				-0.3
1,563,675	+				+1.2
1,563,675	+				+0.4
1,563,715	+				-0.2
1,563,716	-				-0.7
1,563,716	-				-0.2
1,563,717	+				-0.5
1,563,718	-				+1.5
1,563,718	-				-2.6
1,563,718	-				-1.4
1,563,718	-				+0.1
1,563,745	+				+0.5
1,563,745	+				-1.2
1,563,745	+				+2.3
1,563,745	+				+0.7
1,563,745	+				+0.4
1,563,745	+				-0.8
1,563,745	+				-1.2
1,563,745	+				-0.0
1,563,745	+				+1.1
1,563,745	+				-0.9
1,563,745	+				+2.5
1,563,746	-				-0.7
1,563,746	-				-1.2
1,563,746	-				-1.2
1,563,746	-				-1.7
1,563,746	-				-0.1
1,563,746	-				-0.2
1,563,746	-				-2.4
1,563,746	-				-0.0
1,563,746	-				+1.1
1,563,746	-				-2.9
1,563,746	-				-1.3
1,563,747	+				+0.2
1,563,747	+				-1.3
1,563,747	+				+0.8
1,563,747	+				-2.0
1,563,816	+				-0.9
1,563,816	+				-1.1
1,563,856	+				+0.1
1,563,856	+				-0.3
1,563,964	+		Sama_1275	0.10	-0.9
1,563,966	+		Sama_1275	0.10	-1.0
1,563,967	-		Sama_1275	0.10	+1.3
1,563,967	-		Sama_1275	0.10	-0.2
1,563,985	+		Sama_1275	0.11	+0.3
1,563,985	+		Sama_1275	0.11	+0.1
1,563,986	-		Sama_1275	0.11	+1.2
1,563,986	-		Sama_1275	0.11	-0.4
1,563,986	-		Sama_1275	0.11	+0.0
1,563,986	-		Sama_1275	0.11	+0.1
1,563,986	-		Sama_1275	0.11	-1.4
1,563,987	+		Sama_1275	0.11	-1.4
1,563,988	-		Sama_1275	0.11	-1.3
1,564,013	+		Sama_1275	0.13	-0.3
1,564,013	+		Sama_1275	0.13	-1.1
1,564,013	+		Sama_1275	0.13	-0.2
1,564,014	-		Sama_1275	0.13	-2.2
1,564,014	-		Sama_1275	0.13	-0.6
1,564,014	-		Sama_1275	0.13	+1.8
1,564,014	-		Sama_1275	0.13	+2.4
1,564,102	-		Sama_1275	0.17	+0.7
1,564,162	+		Sama_1275	0.20	+0.5
1,564,162	+		Sama_1275	0.20	+0.5
1,564,162	+		Sama_1275	0.20	+0.0
1,564,162	+		Sama_1275	0.20	-1.4
1,564,163	-		Sama_1275	0.20	+0.0
1,564,163	-		Sama_1275	0.20	-0.1
1,564,220	+		Sama_1275	0.22	+0.7
1,564,220	+		Sama_1275	0.22	-0.9
1,564,220	+		Sama_1275	0.22	+2.8
1,564,220	+		Sama_1275	0.22	-0.2
1,564,220	+		Sama_1275	0.22	-0.6
1,564,220	+		Sama_1275	0.22	+2.0
1,564,221	-		Sama_1275	0.22	-0.6
1,564,221	-		Sama_1275	0.22	-0.3
1,564,221	-		Sama_1275	0.22	+0.1
1,564,221	-		Sama_1275	0.22	+0.3
1,564,225	+		Sama_1275	0.23	-0.8
1,564,241	-		Sama_1275	0.23	-0.8
1,564,308	+		Sama_1275	0.26	+2.6
1,564,309	-		Sama_1275	0.26	-1.5
1,564,344	+		Sama_1275	0.28	-0.1
1,564,402	+		Sama_1275	0.31	-0.8
1,564,402	+		Sama_1275	0.31	-2.7
1,564,402	+		Sama_1275	0.31	-1.3
1,564,403	-		Sama_1275	0.31	-0.7
1,564,447	+		Sama_1275	0.33	-0.0
1,564,447	+		Sama_1275	0.33	+0.5
1,564,447	+		Sama_1275	0.33	-1.0
1,564,447	+		Sama_1275	0.33	+1.4
1,564,447	+		Sama_1275	0.33	-0.3
1,564,448	-		Sama_1275	0.33	+1.2
1,564,448	-		Sama_1275	0.33	+0.8
1,564,448	-		Sama_1275	0.33	+1.0
1,564,448	-		Sama_1275	0.33	-1.2
1,564,448	-		Sama_1275	0.33	-1.6
1,564,448	-		Sama_1275	0.33	+0.4
1,564,448	-		Sama_1275	0.33	-2.1
1,564,448	-		Sama_1275	0.33	-0.8
1,564,462	+		Sama_1275	0.34	-1.0
1,564,462	+		Sama_1275	0.34	-1.5
1,564,463	-		Sama_1275	0.34	-1.5
1,564,463	-		Sama_1275	0.34	+1.5