Strain Fitness in Shewanella amazonensis SB2B around Sama_3629

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
4,272,282	+		Sama_3628	0.44	-1.6
4,272,312	-		Sama_3628	0.46	-1.8
4,272,422	-		Sama_3628	0.53	-0.5
4,272,422	-		Sama_3628	0.53	-1.5
4,272,558	+		Sama_3628	0.61	-3.5
4,272,559	-		Sama_3628	0.61	-2.5
4,272,583	+		Sama_3628	0.63	-2.1
4,272,621	-		Sama_3628	0.65	-2.7
4,272,621	-		Sama_3628	0.65	-1.6
4,272,734	+		Sama_3628	0.72	-2.4
4,272,818	+		Sama_3628	0.77	-4.0
4,272,883	+		Sama_3628	0.81	-2.4
4,272,883	+		Sama_3628	0.81	-2.2
4,272,884	-		Sama_3628	0.81	+0.2
4,272,884	-		Sama_3628	0.81	-1.6
4,272,884	-		Sama_3628	0.81	-1.3
4,272,910	+		Sama_3628	0.83	-2.2
4,272,910	+		Sama_3628	0.83	-0.5
4,273,109	+				+0.6
4,273,126	+				-2.0
4,273,126	+				-2.0
4,273,256	+				-0.3
4,273,256	+				+0.6
4,273,256	+				-1.3
4,273,256	+				-0.5
4,273,257	-				-0.2
4,273,257	-				+0.8
4,273,257	-				+0.2
4,273,257	-				+1.4
4,273,257	-				-2.1
4,273,257	-				+1.0
4,273,257	-				-0.2
4,273,271	+				+1.1
4,273,272	-				-0.4
4,273,272	-				+0.5
4,273,374	-		Sama_3629	0.15	-1.7
4,273,378	+		Sama_3629	0.16	+1.0
4,273,379	+		Sama_3629	0.16	-0.3
4,273,379	+		Sama_3629	0.16	-1.8
4,273,379	+		Sama_3629	0.16	-0.3
4,273,379	+		Sama_3629	0.16	-0.3
4,273,380	-		Sama_3629	0.16	-1.8
4,273,380	-		Sama_3629	0.16	-0.6
4,273,380	-		Sama_3629	0.16	+1.2
4,273,400	-		Sama_3629	0.19	+0.7
4,273,400	-		Sama_3629	0.19	-0.6
4,273,521	+		Sama_3629	0.35	+0.4
4,273,521	+		Sama_3629	0.35	-1.1
4,273,522	-		Sama_3629	0.35	-2.7
4,273,522	-		Sama_3629	0.35	-0.0
4,273,522	-		Sama_3629	0.35	-0.4
4,273,575	+		Sama_3629	0.42	-2.3
4,273,576	-		Sama_3629	0.42	+0.5
4,273,576	-		Sama_3629	0.42	-0.1
4,273,576	-		Sama_3629	0.42	-0.7
4,273,576	-		Sama_3629	0.42	+2.4
4,273,576	-		Sama_3629	0.42	+0.8
4,273,576	-		Sama_3629	0.42	-0.8
4,273,586	+		Sama_3629	0.43	+1.2
4,273,587	-		Sama_3629	0.43	+2.9
4,273,587	-		Sama_3629	0.43	-1.1
4,273,697	+		Sama_3629	0.58	+0.7
4,273,697	+		Sama_3629	0.58	-0.4
4,273,697	+		Sama_3629	0.58	-0.7
4,273,698	-		Sama_3629	0.58	-1.1
4,273,698	-		Sama_3629	0.58	+0.3
4,273,698	-		Sama_3629	0.58	-2.4
4,273,837	+		Sama_3629	0.76	+0.2
4,273,837	+		Sama_3629	0.76	+0.2
4,273,837	+		Sama_3629	0.76	-0.3
4,273,838	-		Sama_3629	0.76	+0.2
4,273,872	+		Sama_3629	0.81	+0.6
4,273,872	+		Sama_3629	0.81	+0.6
4,273,872	+		Sama_3629	0.81	+1.3
4,273,873	-		Sama_3629	0.81	-1.5
4,273,873	-		Sama_3629	0.81	+1.4
4,273,873	-		Sama_3629	0.81	+0.6
4,273,873	-		Sama_3629	0.81	+3.5
4,273,873	-		Sama_3629	0.81	-1.3
4,273,891	-		Sama_3629	0.83	-1.3
4,273,925	+		Sama_3629	0.88	-0.6
4,273,925	+		Sama_3629	0.88	-1.7
4,273,959	+				+1.3
4,273,959	+				+0.3
4,273,959	+				-0.6
4,273,960	-				+1.2
4,273,960	-				-0.2
4,273,985	+				-1.4
4,273,997	+				+1.8
4,273,997	+				+1.3
4,273,997	+				-0.6
4,274,003	-				-1.3
4,274,003	-				+1.0
4,274,003	-				+0.0
4,274,003	-				-2.4
4,274,068	-				+0.6
4,274,068	-				+0.7
4,274,068	-				+1.3
4,274,140	+		Sama_3630	0.14	-0.6
4,274,140	+		Sama_3630	0.14	-0.2
4,274,140	+		Sama_3630	0.14	+0.8
4,274,140	+		Sama_3630	0.14	+2.3
4,274,140	+		Sama_3630	0.14	+0.2
4,274,141	-		Sama_3630	0.14	-2.9
4,274,141	-		Sama_3630	0.14	-0.6
4,274,141	-		Sama_3630	0.14	+2.5
4,274,141	-		Sama_3630	0.14	-0.6
4,274,141	-		Sama_3630	0.14	+1.1
4,274,141	-		Sama_3630	0.14	+0.1
4,274,141	-		Sama_3630	0.14	-1.3
4,274,141	-		Sama_3630	0.14	+1.7
4,274,141	-		Sama_3630	0.14	+1.7
4,274,169	+		Sama_3630	0.19	+1.0
4,274,170	-		Sama_3630	0.20	+0.7
4,274,170	-		Sama_3630	0.20	+0.5
4,274,170	-		Sama_3630	0.20	+1.1
4,274,181	+		Sama_3630	0.22	-0.6
4,274,181	+		Sama_3630	0.22	-0.4
4,274,181	+		Sama_3630	0.22	+0.8
4,274,181	+		Sama_3630	0.22	-1.3
4,274,181	+		Sama_3630	0.22	-2.6
4,274,182	-		Sama_3630	0.22	-2.1
4,274,182	-		Sama_3630	0.22	-1.4
4,274,182	-		Sama_3630	0.22	+1.3
4,274,192	+		Sama_3630	0.24	-0.6
4,274,192	+		Sama_3630	0.24	-0.7
4,274,192	+		Sama_3630	0.24	-1.7
4,274,192	+		Sama_3630	0.24	+0.1
4,274,192	+		Sama_3630	0.24	+0.2
4,274,193	-		Sama_3630	0.24	-2.4
4,274,281	-		Sama_3630	0.40	+0.8
4,274,397	+		Sama_3630	0.61	+0.0
4,274,397	+		Sama_3630	0.61	-1.6
4,274,397	+		Sama_3630	0.61	+2.2
4,274,397	+		Sama_3630	0.61	-1.6
4,274,397	+		Sama_3630	0.61	+1.2
4,274,398	-		Sama_3630	0.61	-0.7
4,274,398	-		Sama_3630	0.61	-2.3
4,274,398	-		Sama_3630	0.61	+2.2
4,274,403	+		Sama_3630	0.62	-0.8
4,274,425	+		Sama_3630	0.66	+1.7
4,274,425	+		Sama_3630	0.66	+0.2
4,274,425	+		Sama_3630	0.66	+0.1
4,274,426	-		Sama_3630	0.66	+0.2
4,274,426	-		Sama_3630	0.66	-0.5
4,274,426	-		Sama_3630	0.66	-0.1
4,274,430	+		Sama_3630	0.67	-3.0
4,274,430	+		Sama_3630	0.67	+1.9
4,274,431	-		Sama_3630	0.67	+0.7
4,274,431	-		Sama_3630	0.67	+0.9
4,274,431	-		Sama_3630	0.67	-1.3
4,274,454	+		Sama_3630	0.71	+0.5
4,274,455	-		Sama_3630	0.71	+0.0
4,274,492	+		Sama_3630	0.78	-0.2
4,274,492	+		Sama_3630	0.78	+0.8
4,274,492	+		Sama_3630	0.78	+0.3
4,274,493	-		Sama_3630	0.78	-2.1
4,274,493	-		Sama_3630	0.78	+0.1
4,274,493	-		Sama_3630	0.78	-0.6
4,274,527	-		Sama_3630	0.84	-0.3
4,274,538	+		Sama_3630	0.86	-1.0
4,274,560	+				-1.9
4,274,560	+				-1.6
4,274,561	-				+1.9
4,274,561	-				+0.0
4,274,602	+				-0.6
4,274,602	+				+1.5
4,274,602	+				-1.1
4,274,602	+				+1.7
4,274,602	+				+1.6
4,274,603	-				-0.0
4,274,603	-				-2.0
4,274,603	-				+0.2
4,274,603	-				+0.5
4,274,603	-				-1.7
4,274,603	-				-0.8
4,274,603	-				-0.8
4,274,606	+				+1.1
4,274,606	+				-0.3
4,274,606	+				+0.2
4,274,606	+				-0.7
4,274,606	+				-0.8
4,274,606	+				-1.1
4,274,607	-				-0.2
4,274,607	-				-0.9
4,274,607	-				+0.6
4,274,607	-				+0.7
4,274,635	+				+0.1
4,274,635	+				+0.1
4,274,635	+				-0.8
4,274,635	+				-1.3
4,274,636	-				-0.9
4,274,636	-				+1.6
4,274,636	-				+0.2
4,274,636	-				-0.1
4,274,664	+				-0.3
4,274,665	-				+1.0
4,274,666	+				+0.9
4,274,666	+				+0.2
4,274,666	+				+0.1
4,274,666	+				+1.0
4,274,666	+				-0.7
4,274,666	+				-1.2
4,274,666	+				+0.7
4,274,666	+				-1.4
4,274,666	+				-1.1
4,274,667	-				-0.4
4,274,667	-				-0.2
4,274,667	-				+0.1
4,274,667	-				-0.7
4,274,667	-				-0.6
4,274,667	-				+1.2
4,274,667	-				-3.2
4,274,682	-				+0.8
4,274,689	+				+0.2
4,274,719	+				+1.3
4,274,720	-				+0.0
4,274,720	-				-0.2
4,274,720	-				+0.4
4,274,720	-				-0.0
4,274,724	+				-0.1
4,274,724	+				-0.5
4,274,724	+				-0.6
4,274,724	+				+0.2
4,274,725	-				+2.4
4,274,725	-				+1.4
4,274,725	-				-1.1
4,274,725	-				+0.2
4,274,771	+		Sama_3631	0.11	+0.2
4,274,771	+		Sama_3631	0.11	-1.5
4,274,771	+		Sama_3631	0.11	-1.5
4,274,771	+		Sama_3631	0.11	-2.2
4,274,772	-		Sama_3631	0.12	+1.0
4,274,772	-		Sama_3631	0.12	-0.4
4,274,804	+		Sama_3631	0.17	-0.2
4,274,804	+		Sama_3631	0.17	-0.6
4,274,857	+		Sama_3631	0.25	-2.5
4,274,857	+		Sama_3631	0.25	-0.3
4,274,908	-		Sama_3631	0.33	-0.0
4,274,923	+		Sama_3631	0.36	-0.3
4,274,923	+		Sama_3631	0.36	-0.9
4,274,924	-		Sama_3631	0.36	+1.3
4,274,944	-		Sama_3631	0.39	-0.0
4,274,953	-		Sama_3631	0.41	+1.5