Strain Fitness in Shewanella amazonensis SB2B around Sama_3173

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,760,453	+		Sama_3171	0.66	-2.4
3,760,500	+		Sama_3171	0.70	-4.6
3,760,501	-		Sama_3171	0.70	-3.3
3,760,501	-		Sama_3171	0.70	-1.7
3,760,538	+		Sama_3171	0.73	-1.7
3,760,539	-		Sama_3171	0.73	-3.7
3,760,539	-		Sama_3171	0.73	-5.0
3,760,564	+		Sama_3171	0.75	-2.9
3,760,565	-		Sama_3171	0.75	-1.1
3,760,567	+		Sama_3171	0.75	-1.4
3,760,567	+		Sama_3171	0.75	-3.7
3,760,567	+		Sama_3171	0.75	-4.8
3,760,567	+		Sama_3171	0.75	-3.3
3,760,567	+		Sama_3171	0.75	-2.9
3,760,567	+		Sama_3171	0.75	-4.9
3,760,567	+		Sama_3171	0.75	-2.5
3,760,568	-		Sama_3171	0.76	-2.9
3,760,568	-		Sama_3171	0.76	-2.7
3,760,568	-		Sama_3171	0.76	-3.2
3,760,620	+		Sama_3171	0.80	-0.9
3,760,620	+		Sama_3171	0.80	-1.6
3,760,620	+		Sama_3171	0.80	-2.4
3,760,620	+		Sama_3171	0.80	-4.1
3,760,621	-		Sama_3171	0.80	-2.9
3,760,621	-		Sama_3171	0.80	-1.9
3,760,621	-		Sama_3171	0.80	-3.4
3,760,621	-		Sama_3171	0.80	-2.5
3,760,621	-		Sama_3171	0.80	-1.3
3,760,621	-		Sama_3171	0.80	-3.3
3,760,621	-		Sama_3171	0.80	-4.8
3,760,632	+		Sama_3171	0.81	-3.2
3,760,632	+		Sama_3171	0.81	-4.5
3,760,632	+		Sama_3171	0.81	-2.0
3,760,632	+		Sama_3171	0.81	-2.3
3,760,632	+		Sama_3171	0.81	-3.6
3,760,632	+		Sama_3171	0.81	-3.3
3,760,632	+		Sama_3171	0.81	-1.7
3,760,632	+		Sama_3171	0.81	-2.4
3,760,632	+		Sama_3171	0.81	-4.0
3,760,632	+		Sama_3171	0.81	-4.6
3,760,632	+		Sama_3171	0.81	-3.6
3,760,632	+		Sama_3171	0.81	-2.1
3,760,632	+		Sama_3171	0.81	-2.6
3,760,632	+		Sama_3171	0.81	-0.9
3,760,632	+		Sama_3171	0.81	-3.4
3,760,633	-		Sama_3171	0.81	-3.8
3,760,633	-		Sama_3171	0.81	-3.1
3,760,633	-		Sama_3171	0.81	-2.5
3,760,633	-		Sama_3171	0.81	-3.7
3,760,633	-		Sama_3171	0.81	-3.8
3,760,633	-		Sama_3171	0.81	-3.7
3,760,633	-		Sama_3171	0.81	-3.6
3,760,633	-		Sama_3171	0.81	-3.4
3,760,635	+		Sama_3171	0.81	-3.4
3,760,635	+		Sama_3171	0.81	-2.7
3,760,684	-		Sama_3171	0.86	-4.5
3,760,710	+		Sama_3171	0.88	-2.7
3,760,710	+		Sama_3171	0.88	-3.1
3,760,712	+		Sama_3171	0.88	-4.1
3,760,712	+		Sama_3171	0.88	-3.1
3,760,713	-		Sama_3171	0.88	-3.5
3,760,713	-		Sama_3171	0.88	-2.1
3,760,713	-		Sama_3171	0.88	-3.4
3,760,751	+				-4.5
3,760,751	+				-3.5
3,760,751	+				-2.3
3,760,751	+				-3.1
3,760,751	+				-4.2
3,760,751	+				-4.6
3,760,766	+				-3.1
3,760,767	-				-1.4
3,760,767	-				-2.3
3,760,767	-				-3.1
3,760,807	+				-4.9
3,760,807	+				-2.6
3,760,807	+				-3.9
3,760,807	+				-3.8
3,760,807	+				-3.0
3,760,856	+				-3.6
3,760,857	-				-3.7
3,760,857	-				-3.3
3,760,870	+				-5.2
3,760,871	-				-0.6
3,760,883	+				-3.2
3,760,908	-				+0.3
3,760,911	+				-2.1
3,760,911	+				-1.9
3,760,911	+				-3.9
3,760,911	+				-1.4
3,760,912	-				+2.8
3,760,912	-				+3.2
3,760,932	+				+0.1
3,760,933	-				+0.7
3,760,938	+				-1.2
3,760,939	-				+0.1
3,760,972	+				+2.7
3,761,001	+				+1.7
3,761,012	+				+3.3
3,761,012	+				+3.9
3,761,012	+				+4.9
3,761,012	+				+4.6
3,761,012	+				+3.6
3,761,013	-				+1.2
3,761,013	-				-1.6
3,761,013	-				+2.5
3,761,149	+		Sama_3172	0.26	-1.3
3,761,188	+		Sama_3172	0.39	-1.6
3,761,261	+		Sama_3172	0.62	-1.3
3,761,261	+		Sama_3172	0.62	-1.6
3,761,378	+				+2.1
3,761,378	+				-0.7
3,761,378	+				+0.1
3,761,378	+				-0.4
3,761,379	-				-0.6
3,761,393	+				+1.1
3,761,393	+				+0.0
3,761,393	+				+0.9
3,761,393	+				-0.9
3,761,393	+				+0.5
3,761,393	+				-1.6
3,761,393	+				+0.5
3,761,393	+				-1.7
3,761,393	+				-0.8
3,761,393	+				-1.1
3,761,393	+				-0.9
3,761,393	+				-2.0
3,761,393	+				+0.5
3,761,393	+				-1.7
3,761,393	+				+0.5
3,761,393	+				+0.5
3,761,394	-				-0.5
3,761,394	-				-0.3
3,761,394	-				+1.3
3,761,395	+				-3.6
3,761,395	+				+1.5
3,761,395	+				+0.6
3,761,395	+				-0.6
3,761,395	+				+0.3
3,761,396	-				+1.5
3,761,487	-				+2.5
3,761,556	+		Sama_3173	0.15	+0.1
3,761,556	+		Sama_3173	0.15	+0.8
3,761,667	+		Sama_3173	0.30	-0.4
3,761,667	+		Sama_3173	0.30	+1.7
3,761,667	+		Sama_3173	0.30	-1.3
3,761,667	+		Sama_3173	0.30	-0.9
3,761,667	+		Sama_3173	0.30	+1.7
3,761,696	+		Sama_3173	0.34	-0.6
3,761,697	-		Sama_3173	0.34	+1.3
3,761,737	+		Sama_3173	0.40	-0.3
3,761,738	-		Sama_3173	0.40	-0.9
3,761,810	+		Sama_3173	0.49	-0.4
3,761,811	-		Sama_3173	0.50	+0.4
3,761,829	-		Sama_3173	0.52	+1.0
3,761,863	+		Sama_3173	0.57	-0.2
3,761,864	-		Sama_3173	0.57	+0.5
3,761,919	-		Sama_3173	0.64	+0.9
3,761,975	+		Sama_3173	0.72	-1.1
3,761,975	+		Sama_3173	0.72	+1.0
3,761,998	+		Sama_3173	0.75	+0.2
3,761,998	+		Sama_3173	0.75	-0.6
3,761,999	-		Sama_3173	0.75	-1.4
3,762,055	-		Sama_3173	0.83	-2.8
3,762,205	+				+0.7
3,762,205	+				+0.0
3,762,206	-				-0.7
3,762,214	+				+0.0
3,762,215	-				+0.1
3,762,215	-				+2.6
3,762,248	+				-0.3
3,762,248	+				-0.0
3,762,248	+				+2.1
3,762,249	-				+1.9
3,762,249	-				+1.1
3,762,249	-				-2.4
3,762,260	+				+1.0
3,762,260	+				-0.6
3,762,261	-				+1.2
3,762,261	-				-0.3
3,762,291	+				-2.2
3,762,291	+				-0.5
3,762,291	+				-2.2
3,762,292	-				+1.0
3,762,292	-				+0.7
3,762,317	-				-0.1
3,762,317	-				+0.4
3,762,320	+				-0.8
3,762,320	+				+1.2
3,762,321	-				-0.8
3,762,321	-				-4.2
3,762,321	-				-1.6
3,762,410	-		Sama_3174	0.17	+0.5
3,762,410	-		Sama_3174	0.17	+1.1
3,762,450	+		Sama_3174	0.21	-1.9
3,762,450	+		Sama_3174	0.21	+0.8
3,762,450	+		Sama_3174	0.21	-0.2
3,762,464	+		Sama_3174	0.22	-1.1
3,762,465	-		Sama_3174	0.22	+0.9
3,762,526	+		Sama_3174	0.27	+0.7
3,762,552	+		Sama_3174	0.29	-0.6
3,762,553	-		Sama_3174	0.29	-0.9
3,762,553	-		Sama_3174	0.29	+0.8
3,762,553	-		Sama_3174	0.29	-0.4
3,762,654	-		Sama_3174	0.38	-0.7
3,762,718	+		Sama_3174	0.43	+4.4
3,762,719	-		Sama_3174	0.43	+0.7
3,762,719	-		Sama_3174	0.43	-0.4
3,762,719	-		Sama_3174	0.43	+1.0
3,762,722	+		Sama_3174	0.43	-1.4
3,762,722	+		Sama_3174	0.43	-0.3
3,762,722	+		Sama_3174	0.43	+0.5
3,762,722	+		Sama_3174	0.43	+0.6
3,762,722	+		Sama_3174	0.43	-0.5
3,762,722	+		Sama_3174	0.43	+1.3
3,762,722	+		Sama_3174	0.43	+0.6
3,762,722	+		Sama_3174	0.43	+1.2
3,762,722	+		Sama_3174	0.43	-0.2
3,762,722	+		Sama_3174	0.43	-3.7
3,762,723	-		Sama_3174	0.43	+2.7
3,762,723	-		Sama_3174	0.43	+0.9
3,762,723	-		Sama_3174	0.43	+0.4
3,762,723	-		Sama_3174	0.43	+1.7
3,762,723	-		Sama_3174	0.43	+0.3
3,762,723	-		Sama_3174	0.43	-0.4
3,762,723	-		Sama_3174	0.43	+0.1
3,762,723	-		Sama_3174	0.43	-1.6
3,762,774	-		Sama_3174	0.48	-2.8
3,762,774	-		Sama_3174	0.48	+0.2
3,762,774	-		Sama_3174	0.48	+0.2
3,762,781	-		Sama_3174	0.48	-0.9
3,762,781	-		Sama_3174	0.48	-0.1
3,762,781	-		Sama_3174	0.48	-0.3
3,762,786	+		Sama_3174	0.49	+0.1
3,762,852	+		Sama_3174	0.54	-1.8
3,762,852	+		Sama_3174	0.54	+0.5
3,762,853	-		Sama_3174	0.54	+1.7
3,762,853	-		Sama_3174	0.54	-0.0
3,762,853	-		Sama_3174	0.54	+0.6
3,762,947	-		Sama_3174	0.62	+1.3
3,762,947	-		Sama_3174	0.62	-1.9
3,762,955	+		Sama_3174	0.63	-1.9
3,762,958	+		Sama_3174	0.63	+1.2
3,762,958	+		Sama_3174	0.63	-0.9
3,762,958	+		Sama_3174	0.63	+0.2
3,762,958	+		Sama_3174	0.63	-0.5
3,762,958	+		Sama_3174	0.63	+3.1
3,762,958	+		Sama_3174	0.63	+0.6
3,762,958	+		Sama_3174	0.63	+0.3
3,762,958	+		Sama_3174	0.63	-0.4
3,762,958	+		Sama_3174	0.63	-0.8
3,762,958	+		Sama_3174	0.63	+0.5
3,762,959	-		Sama_3174	0.63	+1.6
3,762,959	-		Sama_3174	0.63	-2.6
3,762,963	-		Sama_3174	0.64	+1.3
3,763,005	+		Sama_3174	0.67	-1.4
3,763,006	-		Sama_3174	0.67	-0.5
3,763,006	-		Sama_3174	0.67	-1.4
3,763,006	-		Sama_3174	0.67	+1.9
3,763,006	-		Sama_3174	0.67	-1.3
3,763,022	-		Sama_3174	0.69	+0.6
3,763,047	+		Sama_3174	0.71	+0.8
3,763,047	+		Sama_3174	0.71	-1.3
3,763,048	-		Sama_3174	0.71	+0.8
3,763,048	-		Sama_3174	0.71	+0.5
3,763,048	-		Sama_3174	0.71	-0.3
3,763,048	-		Sama_3174	0.71	+0.4
3,763,076	+		Sama_3174	0.73	+0.4
3,763,126	+		Sama_3174	0.77	+0.6
3,763,126	+		Sama_3174	0.77	+0.6
3,763,126	+		Sama_3174	0.77	-0.1
3,763,126	+		Sama_3174	0.77	-1.2
3,763,126	+		Sama_3174	0.77	+0.2
3,763,127	-		Sama_3174	0.77	+0.2
3,763,127	-		Sama_3174	0.77	+0.6
3,763,127	-		Sama_3174	0.77	-0.8
3,763,127	-		Sama_3174	0.77	+0.5
3,763,127	-		Sama_3174	0.77	+0.1
3,763,127	-		Sama_3174	0.77	+0.2
3,763,130	+		Sama_3174	0.78	+1.0
3,763,131	-		Sama_3174	0.78	-0.7
3,763,131	-		Sama_3174	0.78	+1.2
3,763,131	-		Sama_3174	0.78	+0.9
3,763,160	+		Sama_3174	0.80	-1.1
3,763,160	+		Sama_3174	0.80	+0.9
3,763,160	+		Sama_3174	0.80	-0.2
3,763,160	+		Sama_3174	0.80	-0.1
3,763,161	-		Sama_3174	0.80	+1.1
3,763,161	-		Sama_3174	0.80	+1.5
3,763,161	-		Sama_3174	0.80	-0.4
3,763,161	-		Sama_3174	0.80	-0.1