Strain Fitness in Shewanella amazonensis SB2B around Sama_3101

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,673,878	-		Sama_3099	0.79	-0.4
3,673,878	-		Sama_3099	0.79	+1.4
3,673,878	-		Sama_3099	0.79	+1.5
3,673,893	-		Sama_3099	0.81	+0.6
3,673,907	+		Sama_3099	0.83	-1.3
3,673,907	+		Sama_3099	0.83	-0.5
3,673,907	+		Sama_3099	0.83	+2.2
3,673,907	+		Sama_3099	0.83	+1.6
3,673,907	+		Sama_3099	0.83	-1.0
3,673,907	+		Sama_3099	0.83	+2.1
3,673,907	+		Sama_3099	0.83	+0.1
3,673,908	-		Sama_3099	0.83	-0.4
3,673,908	-		Sama_3099	0.83	-0.3
3,673,908	-		Sama_3099	0.83	+1.3
3,673,908	-		Sama_3099	0.83	+1.0
3,673,908	-		Sama_3099	0.83	+0.2
3,673,908	-		Sama_3099	0.83	+0.4
3,673,908	-		Sama_3099	0.83	+1.0
3,673,908	-		Sama_3099	0.83	+0.3
3,673,908	-		Sama_3099	0.83	-0.5
3,673,911	+		Sama_3099	0.84	-0.7
3,673,911	+		Sama_3099	0.84	-0.8
3,673,911	+		Sama_3099	0.84	-2.6
3,673,911	+		Sama_3099	0.84	+0.7
3,673,911	+		Sama_3099	0.84	-1.6
3,673,911	+		Sama_3099	0.84	-1.8
3,673,911	+		Sama_3099	0.84	-2.5
3,673,911	+		Sama_3099	0.84	-0.4
3,673,911	+		Sama_3099	0.84	+0.5
3,673,912	-		Sama_3099	0.84	-0.1
3,673,912	-		Sama_3099	0.84	+0.3
3,673,912	-		Sama_3099	0.84	+0.2
3,673,912	-		Sama_3099	0.84	-0.0
3,673,912	-		Sama_3099	0.84	-0.8
3,673,912	-		Sama_3099	0.84	-3.0
3,673,912	-		Sama_3099	0.84	-0.3
3,673,912	-		Sama_3099	0.84	+0.7
3,673,912	-		Sama_3099	0.84	-0.3
3,673,912	-		Sama_3099	0.84	+0.8
3,673,912	-		Sama_3099	0.84	+0.6
3,673,912	-		Sama_3099	0.84	-0.4
3,673,912	-		Sama_3099	0.84	+1.6
3,673,912	-		Sama_3099	0.84	-1.4
3,673,917	+		Sama_3099	0.85	+1.4
3,673,917	+		Sama_3099	0.85	+0.4
3,673,917	+		Sama_3099	0.85	-0.7
3,673,917	+		Sama_3099	0.85	-0.2
3,673,917	+		Sama_3099	0.85	-0.1
3,673,918	-		Sama_3099	0.85	-0.6
3,673,918	-		Sama_3099	0.85	-0.2
3,673,918	-		Sama_3099	0.85	-0.2
3,673,953	+		Sama_3099	0.90	-1.3
3,673,953	+		Sama_3099	0.90	+0.1
3,673,953	+		Sama_3099	0.90	-3.0
3,673,953	+		Sama_3099	0.90	+0.8
3,673,953	+		Sama_3099	0.90	+1.1
3,673,953	+		Sama_3099	0.90	-0.5
3,673,953	+		Sama_3099	0.90	-0.6
3,673,953	+		Sama_3099	0.90	-3.7
3,673,954	-				+0.1
3,673,954	-				-1.6
3,673,954	-				+0.3
3,673,954	-				-0.9
3,673,967	+				+0.1
3,673,967	+				+0.0
3,673,968	-				+0.6
3,673,968	-				+0.5
3,674,009	+				-1.4
3,674,009	+				-1.0
3,674,010	-				+0.1
3,674,010	-				-0.1
3,674,017	+				+0.7
3,674,018	-				-1.9
3,674,033	+				+1.9
3,674,033	+				+0.2
3,674,033	+				-0.8
3,674,034	-				-0.2
3,674,067	+				-0.4
3,674,068	-				-0.9
3,674,068	-				-2.5
3,674,097	+				+0.8
3,674,097	+				+1.1
3,674,117	+				-0.6
3,674,117	+				-0.7
3,674,156	-				+1.8
3,674,156	-				-3.4
3,674,162	+				+0.1
3,674,163	-		Sama_3100	0.10	+0.7
3,674,163	-		Sama_3100	0.10	-1.0
3,674,296	+		Sama_3100	0.35	+0.3
3,674,297	-		Sama_3100	0.35	-1.2
3,674,303	+		Sama_3100	0.36	-0.0
3,674,330	+		Sama_3100	0.41	-0.7
3,674,521	+		Sama_3100	0.76	+0.4
3,674,572	-		Sama_3100	0.86	-0.3
3,674,572	-		Sama_3100	0.86	-0.3
3,674,585	+		Sama_3100	0.88	+0.4
3,674,586	-		Sama_3100	0.88	+0.2
3,674,586	-		Sama_3100	0.88	-0.0
3,674,586	-		Sama_3100	0.88	-2.9
3,674,586	-		Sama_3100	0.88	+0.1
3,674,592	+		Sama_3100	0.89	-0.6
3,674,592	+		Sama_3100	0.89	+0.6
3,674,593	-		Sama_3100	0.90	+0.6
3,674,593	-		Sama_3100	0.90	+0.8
3,674,593	-		Sama_3100	0.90	+1.9
3,674,606	+				-0.4
3,674,606	+				+0.1
3,674,606	+				+0.0
3,674,607	-				-0.9
3,674,607	-				-3.0
3,674,607	-				+0.8
3,674,612	+				+0.0
3,674,613	-				-0.4
3,674,613	-				+0.7
3,674,630	+				-0.2
3,674,630	+				+1.7
3,674,695	+				-0.5
3,674,695	+				+0.6
3,674,695	+				-0.6
3,674,695	+				+1.3
3,674,696	-				+0.6
3,674,752	-				-0.4
3,674,761	+				-1.0
3,674,762	-				+0.9
3,674,762	-				-0.0
3,674,762	-				-0.1
3,674,766	+				-0.3
3,674,766	+				+1.0
3,674,767	-				-0.7
3,674,778	+				-1.1
3,674,785	+				-1.1
3,674,786	-				+2.3
3,674,786	-				-0.8
3,674,786	-				+1.1
3,674,790	+				+0.3
3,674,790	+				+0.4
3,674,790	+				+0.8
3,674,791	-				-0.9
3,674,791	-				-0.5
3,674,791	-				-1.6
3,674,826	+				-1.0
3,674,827	-				+2.0
3,674,827	-				-1.9
3,674,827	-				+0.1
3,674,827	-				+0.5
3,674,837	+				+0.7
3,674,838	-				+0.4
3,674,838	-				+0.1
3,674,846	-				+1.0
3,674,846	-				-0.1
3,674,950	+		Sama_3101	0.12	-0.1
3,674,950	+		Sama_3101	0.12	-0.5
3,674,951	-		Sama_3101	0.12	+0.4
3,674,951	-		Sama_3101	0.12	+2.0
3,674,951	-		Sama_3101	0.12	+0.5
3,674,951	-		Sama_3101	0.12	+0.2
3,674,951	-		Sama_3101	0.12	+0.8
3,674,951	-		Sama_3101	0.12	-1.2
3,674,951	-		Sama_3101	0.12	-0.2
3,674,951	-		Sama_3101	0.12	-0.3
3,674,951	-		Sama_3101	0.12	-1.4
3,674,951	-		Sama_3101	0.12	+0.8
3,674,951	-		Sama_3101	0.12	+0.4
3,674,955	+		Sama_3101	0.13	+1.0
3,674,985	-		Sama_3101	0.15	-0.1
3,675,041	-		Sama_3101	0.20	-0.3
3,675,041	-		Sama_3101	0.20	+0.1
3,675,066	+		Sama_3101	0.22	-2.3
3,675,066	+		Sama_3101	0.22	-1.5
3,675,067	-		Sama_3101	0.22	+0.7
3,675,067	-		Sama_3101	0.22	+1.4
3,675,067	-		Sama_3101	0.22	+1.0
3,675,067	-		Sama_3101	0.22	+0.9
3,675,067	-		Sama_3101	0.22	-0.7
3,675,067	-		Sama_3101	0.22	+0.5
3,675,099	+		Sama_3101	0.25	-2.0
3,675,099	+		Sama_3101	0.25	-0.5
3,675,099	+		Sama_3101	0.25	+1.7
3,675,099	+		Sama_3101	0.25	-1.3
3,675,099	+		Sama_3101	0.25	+0.7
3,675,099	+		Sama_3101	0.25	+1.1
3,675,100	-		Sama_3101	0.25	+1.0
3,675,100	-		Sama_3101	0.25	-0.5
3,675,100	-		Sama_3101	0.25	-1.5
3,675,100	-		Sama_3101	0.25	-1.4
3,675,100	-		Sama_3101	0.25	+0.8
3,675,100	-		Sama_3101	0.25	+1.5
3,675,100	-		Sama_3101	0.25	-1.4
3,675,107	+		Sama_3101	0.26	-0.9
3,675,108	-		Sama_3101	0.26	-1.0
3,675,115	-		Sama_3101	0.26	-0.4
3,675,154	+		Sama_3101	0.30	+0.4
3,675,155	-		Sama_3101	0.30	+0.9
3,675,155	-		Sama_3101	0.30	-0.0
3,675,214	+		Sama_3101	0.35	+1.1
3,675,214	+		Sama_3101	0.35	+2.0
3,675,214	+		Sama_3101	0.35	-0.1
3,675,215	-		Sama_3101	0.35	+1.1
3,675,215	-		Sama_3101	0.35	+0.1
3,675,225	+		Sama_3101	0.36	-0.7
3,675,225	+		Sama_3101	0.36	+0.4
3,675,225	+		Sama_3101	0.36	+1.8
3,675,226	-		Sama_3101	0.36	+0.0
3,675,226	-		Sama_3101	0.36	-0.1
3,675,226	-		Sama_3101	0.36	-0.2
3,675,228	+		Sama_3101	0.36	-0.2
3,675,228	+		Sama_3101	0.36	+0.4
3,675,228	+		Sama_3101	0.36	+0.7
3,675,228	+		Sama_3101	0.36	+0.6
3,675,229	-		Sama_3101	0.36	+1.3
3,675,327	+		Sama_3101	0.44	-0.3
3,675,328	-		Sama_3101	0.44	-0.9
3,675,384	+		Sama_3101	0.49	+1.5
3,675,385	-		Sama_3101	0.49	-0.0
3,675,393	+		Sama_3101	0.50	+0.6
3,675,393	+		Sama_3101	0.50	-0.3
3,675,393	+		Sama_3101	0.50	-0.6
3,675,394	-		Sama_3101	0.50	-2.4
3,675,394	-		Sama_3101	0.50	-2.0
3,675,394	-		Sama_3101	0.50	+0.5
3,675,394	-		Sama_3101	0.50	+1.1
3,675,456	+		Sama_3101	0.55	+0.7
3,675,457	-		Sama_3101	0.55	-0.7
3,675,506	-		Sama_3101	0.59	+1.4
3,675,623	+		Sama_3101	0.69	+0.4
3,675,624	-		Sama_3101	0.69	-0.3
3,675,708	+		Sama_3101	0.76	+0.4
3,675,708	+		Sama_3101	0.76	+1.3
3,675,709	-		Sama_3101	0.76	+1.0
3,675,709	-		Sama_3101	0.76	-0.6
3,675,709	-		Sama_3101	0.76	+0.2
3,675,709	-		Sama_3101	0.76	-0.8
3,675,709	-		Sama_3101	0.76	-0.4
3,675,726	+		Sama_3101	0.78	-0.3
3,675,727	-		Sama_3101	0.78	-0.9
3,675,748	-		Sama_3101	0.80	+1.8
3,675,755	+		Sama_3101	0.80	-0.3
3,675,755	+		Sama_3101	0.80	-0.4
3,675,755	+		Sama_3101	0.80	+0.3
3,675,755	+		Sama_3101	0.80	-0.2
3,675,756	-		Sama_3101	0.80	-0.0
3,675,756	-		Sama_3101	0.80	+1.0
3,675,756	-		Sama_3101	0.80	-0.2
3,675,845	+		Sama_3101	0.88	+0.7
3,675,846	-		Sama_3101	0.88	+1.0
3,675,846	-		Sama_3101	0.88	+1.2
3,675,846	-		Sama_3101	0.88	+0.8
3,675,853	+		Sama_3101	0.89	+0.6
3,675,854	-		Sama_3101	0.89	+3.6
3,675,854	-		Sama_3101	0.89	+1.4
3,675,870	+				+0.1
3,675,870	+				-0.3
3,675,870	+				-2.4
3,675,871	-				+1.3
3,675,871	-				-0.1
3,675,871	-				-1.5
3,675,934	+				-0.4
3,675,934	+				+0.0
3,675,935	-				-0.0
3,675,999	-				+0.3
3,676,013	-				+0.4
3,676,013	-				-2.6
3,676,066	+				+0.7
3,676,066	+				-0.2
3,676,066	+				-1.9
3,676,066	+				+0.0
3,676,066	+				+1.8
3,676,066	+				-1.9
3,676,067	-				+1.4
3,676,067	-				-1.3
3,676,067	-				+0.2
3,676,067	-				-0.2
3,676,067	-				-1.6
3,676,067	-				-0.2
3,676,067	-				+0.1
3,676,067	-				+0.7
3,676,083	-				+0.2
3,676,118	+				+0.4
3,676,133	+				+2.9
3,676,133	+				+0.1
3,676,133	+				-2.1
3,676,134	-				+0.9
3,676,242	-		Sama_3102	0.15	-0.7
3,676,327	-		Sama_3102	0.26	+1.4
3,676,398	+		Sama_3102	0.35	-1.0
3,676,398	+		Sama_3102	0.35	-0.9
3,676,398	+		Sama_3102	0.35	-1.3
3,676,398	+		Sama_3102	0.35	-0.0
3,676,399	-		Sama_3102	0.35	-0.4
3,676,399	-		Sama_3102	0.35	+0.0
3,676,399	-		Sama_3102	0.35	+1.2
3,676,399	-		Sama_3102	0.35	+0.2
3,676,399	-		Sama_3102	0.35	-1.3
3,676,399	-		Sama_3102	0.35	-0.0
3,676,399	-		Sama_3102	0.35	+0.1
3,676,399	-		Sama_3102	0.35	-2.9
3,676,399	-		Sama_3102	0.35	+2.1
3,676,444	+		Sama_3102	0.41	+0.5
3,676,445	-		Sama_3102	0.41	+0.6
3,676,445	-		Sama_3102	0.41	-1.6
3,676,445	-		Sama_3102	0.41	+0.7
3,676,514	-		Sama_3102	0.50	-1.3
3,676,514	-		Sama_3102	0.50	+0.4
3,676,529	-		Sama_3102	0.52	+0.3
3,676,537	-		Sama_3102	0.53	+1.3
3,676,594	+		Sama_3102	0.60	+0.7
3,676,595	-		Sama_3102	0.61	+0.0
3,676,609	+		Sama_3102	0.62	-0.3
3,676,610	-		Sama_3102	0.62	-0.2
3,676,615	+		Sama_3102	0.63	+2.3
3,676,720	+		Sama_3102	0.77	+0.2
3,676,720	+		Sama_3102	0.77	-0.9
3,676,720	+		Sama_3102	0.77	+0.1
3,676,720	+		Sama_3102	0.77	+0.6
3,676,720	+		Sama_3102	0.77	+0.1
3,676,720	+		Sama_3102	0.77	+1.3
3,676,720	+		Sama_3102	0.77	+0.1
3,676,721	-		Sama_3102	0.77	-2.5
3,676,721	-		Sama_3102	0.77	-0.2
3,676,721	-		Sama_3102	0.77	+0.7
3,676,741	+		Sama_3102	0.80	-2.0
3,676,741	+		Sama_3102	0.80	+1.4
3,676,741	+		Sama_3102	0.80	+0.2
3,676,742	-		Sama_3102	0.80	+1.1
3,676,742	-		Sama_3102	0.80	+0.6
3,676,742	-		Sama_3102	0.80	+1.5
3,676,777	+		Sama_3102	0.84	-0.1
3,676,778	-		Sama_3102	0.84	-0.9
3,676,854	+				-1.1
3,676,854	+				-0.5
3,676,854	+				+1.5
3,676,854	+				-0.8
3,676,854	+				-2.2
3,676,854	+				-0.1
3,676,854	+				+1.0
3,676,854	+				+0.3
3,676,854	+				+0.8
3,676,855	-				-1.3
3,676,855	-				-0.9
3,676,855	-				-0.0
3,676,855	-				-1.9
3,676,855	-				-1.2
3,676,855	-				-0.2
3,676,855	-				-0.6
3,676,855	-				-1.5
3,676,855	-				+1.0
3,676,855	-				-0.1
3,676,855	-				+0.1
3,676,867	+				+2.0
3,676,893	+				+1.4
3,676,893	+				+2.4
3,676,893	+				+0.1
3,676,893	+				-1.4
3,676,894	-				-0.1
3,676,894	-				-0.3
3,676,894	-				-0.7
3,676,894	-				+0.4
3,676,894	-				+0.8
3,676,894	-				-0.7
3,676,897	+				-2.2
3,676,897	+				-1.8
3,676,897	+				-2.7
3,676,897	+				-0.3
3,676,897	+				-0.6
3,676,897	+				+0.5
3,676,897	+				-0.6
3,676,898	-				-0.3
3,676,898	-				-3.2
3,676,898	-				+1.0
3,676,927	+				+0.7
3,676,927	+				-0.4
3,676,928	-				-1.2
3,676,957	+				-0.3
3,676,984	+				+1.9
3,676,985	-				-1.1
3,676,985	-				-1.1