Strain Fitness in Shewanella amazonensis SB2B around Sama_2749

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,286,968	+		Sama_2747	0.75	-2.7
3,286,988	-		Sama_2747	0.76	-1.9
3,287,025	-		Sama_2747	0.79	-0.5
3,287,055	+		Sama_2747	0.81	-2.5
3,287,055	+		Sama_2747	0.81	-0.3
3,287,055	+		Sama_2747	0.81	-4.3
3,287,056	-		Sama_2747	0.81	-0.3
3,287,083	+		Sama_2747	0.83	+1.9
3,287,084	-		Sama_2747	0.83	-1.8
3,287,136	+		Sama_2747	0.87	-3.3
3,287,136	+		Sama_2747	0.87	-3.4
3,287,137	-		Sama_2747	0.87	+0.2
3,287,137	-		Sama_2747	0.87	-2.4
3,287,139	+		Sama_2747	0.87	+1.4
3,287,140	-		Sama_2747	0.87	-1.1
3,287,172	+		Sama_2747	0.89	-1.1
3,287,173	-		Sama_2747	0.89	-3.6
3,287,173	-		Sama_2747	0.89	-2.5
3,287,229	+				-2.2
3,287,230	-				+2.3
3,287,332	-				-2.9
3,287,442	+				-1.1
3,287,442	+				+0.9
3,287,442	+				+0.0
3,287,442	+				-1.4
3,287,442	+				-1.1
3,287,443	-				+0.9
3,287,443	-				-0.1
3,287,443	-				+1.6
3,287,443	-				+1.4
3,287,443	-				-0.2
3,287,462	-		Sama_2748	0.10	-0.1
3,287,462	-		Sama_2748	0.10	+0.7
3,287,468	+		Sama_2748	0.11	-0.4
3,287,468	+		Sama_2748	0.11	-0.1
3,287,468	+		Sama_2748	0.11	-0.1
3,287,469	-		Sama_2748	0.11	-0.2
3,287,469	-		Sama_2748	0.11	+0.4
3,287,482	-		Sama_2748	0.14	+0.8
3,287,482	-		Sama_2748	0.14	+0.1
3,287,550	-		Sama_2748	0.27	-0.1
3,287,550	-		Sama_2748	0.27	-1.8
3,287,558	+		Sama_2748	0.29	-3.0
3,287,558	+		Sama_2748	0.29	-1.0
3,287,558	+		Sama_2748	0.29	+0.2
3,287,558	+		Sama_2748	0.29	+0.7
3,287,558	+		Sama_2748	0.29	+0.7
3,287,558	+		Sama_2748	0.29	+0.8
3,287,558	+		Sama_2748	0.29	-0.2
3,287,558	+		Sama_2748	0.29	-0.0
3,287,558	+		Sama_2748	0.29	+2.2
3,287,558	+		Sama_2748	0.29	+0.7
3,287,558	+		Sama_2748	0.29	-0.2
3,287,558	+		Sama_2748	0.29	-0.5
3,287,558	+		Sama_2748	0.29	-0.5
3,287,558	+		Sama_2748	0.29	-0.5
3,287,559	-		Sama_2748	0.29	-1.8
3,287,559	-		Sama_2748	0.29	+0.7
3,287,559	-		Sama_2748	0.29	+0.2
3,287,559	-		Sama_2748	0.29	-1.4
3,287,559	-		Sama_2748	0.29	-0.8
3,287,559	-		Sama_2748	0.29	-0.5
3,287,559	-		Sama_2748	0.29	-0.6
3,287,559	-		Sama_2748	0.29	+0.5
3,287,559	-		Sama_2748	0.29	+0.1
3,287,559	-		Sama_2748	0.29	+0.9
3,287,559	-		Sama_2748	0.29	-0.7
3,287,559	-		Sama_2748	0.29	+2.0
3,287,559	-		Sama_2748	0.29	+0.4
3,287,559	-		Sama_2748	0.29	-0.2
3,287,559	-		Sama_2748	0.29	+1.2
3,287,559	-		Sama_2748	0.29	+0.4
3,287,630	+		Sama_2748	0.43	-2.2
3,287,630	+		Sama_2748	0.43	+1.3
3,287,630	+		Sama_2748	0.43	+0.1
3,287,631	-		Sama_2748	0.43	+1.1
3,287,631	-		Sama_2748	0.43	-0.4
3,287,631	-		Sama_2748	0.43	+1.3
3,287,658	+		Sama_2748	0.48	-0.8
3,287,658	+		Sama_2748	0.48	+2.4
3,287,659	-		Sama_2748	0.48	+0.8
3,287,659	-		Sama_2748	0.48	+2.0
3,287,711	+		Sama_2748	0.58	+1.9
3,287,711	+		Sama_2748	0.58	-0.5
3,287,712	-		Sama_2748	0.59	+0.2
3,287,736	+		Sama_2748	0.63	+1.9
3,287,765	+		Sama_2748	0.69	+2.1
3,287,765	+		Sama_2748	0.69	+0.5
3,287,765	+		Sama_2748	0.69	-1.4
3,287,765	+		Sama_2748	0.69	-2.2
3,287,765	+		Sama_2748	0.69	-1.4
3,287,765	+		Sama_2748	0.69	-1.4
3,287,766	-		Sama_2748	0.69	+1.1
3,287,766	-		Sama_2748	0.69	+0.3
3,287,766	-		Sama_2748	0.69	+0.3
3,287,798	+		Sama_2748	0.75	-1.3
3,287,919	+				-0.2
3,287,919	+				-0.2
3,287,919	+				-0.3
3,287,919	+				+0.8
3,287,919	+				+1.4
3,287,919	+				-1.6
3,287,920	-				-1.2
3,287,920	-				+0.3
3,287,920	-				-2.8
3,287,920	-				+0.6
3,287,986	+				-1.5
3,287,987	-				-0.1
3,288,021	+		Sama_2749	0.14	-1.1
3,288,021	+		Sama_2749	0.14	+0.6
3,288,021	+		Sama_2749	0.14	+0.6
3,288,022	-		Sama_2749	0.14	+0.2
3,288,073	+		Sama_2749	0.21	+1.5
3,288,073	+		Sama_2749	0.21	+0.5
3,288,074	-		Sama_2749	0.21	-0.5
3,288,074	-		Sama_2749	0.21	+1.3
3,288,113	+		Sama_2749	0.26	+0.6
3,288,114	-		Sama_2749	0.26	+0.3
3,288,114	-		Sama_2749	0.26	+0.5
3,288,157	+		Sama_2749	0.32	-1.0
3,288,157	+		Sama_2749	0.32	-0.4
3,288,157	+		Sama_2749	0.32	+0.9
3,288,158	-		Sama_2749	0.32	-0.5
3,288,158	-		Sama_2749	0.32	+1.0
3,288,175	-		Sama_2749	0.34	+1.5
3,288,270	+		Sama_2749	0.47	+0.4
3,288,694	-				+1.7
3,288,707	-				+0.3
3,288,741	+				+0.0
3,288,860	+				+1.9
3,288,860	+				+0.1
3,288,869	+				+0.4
3,288,870	-				-0.2
3,288,870	-				+0.8
3,288,870	-				-0.7
3,288,904	-				+0.5
3,288,904	-				-1.1
3,288,940	+				+1.5
3,288,941	-				+0.2
3,288,941	-				+2.1
3,289,009	+				-0.4
3,289,009	+				+1.8
3,289,009	+				+1.4
3,289,009	+				-0.3
3,289,009	+				+0.4
3,289,009	+				+0.5
3,289,010	-				+0.6
3,289,010	-				+0.8
3,289,010	-				+0.9
3,289,010	-				+1.2
3,289,010	-				-1.9
3,289,010	-				+1.4
3,289,038	+				+1.4
3,289,039	-				-1.3
3,289,039	-				+0.3
3,289,039	-				+1.5
3,289,039	-				-0.4
3,289,039	-				+0.8
3,289,039	-				-0.4
3,289,039	-				+0.1
3,289,113	+				-0.1
3,289,113	+				+0.4
3,289,153	-				+0.0
3,289,153	-				+0.7
3,289,185	+		Sama_2750	0.13	+1.5
3,289,186	-		Sama_2750	0.13	-0.3
3,289,186	-		Sama_2750	0.13	+0.3
3,289,186	-		Sama_2750	0.13	-2.1
3,289,186	-		Sama_2750	0.13	+1.2
3,289,186	-		Sama_2750	0.13	+0.8
3,289,189	+		Sama_2750	0.14	+0.2
3,289,189	+		Sama_2750	0.14	+0.4
3,289,190	-		Sama_2750	0.14	+0.6
3,289,190	-		Sama_2750	0.14	+0.5
3,289,219	+		Sama_2750	0.17	-0.5
3,289,219	+		Sama_2750	0.17	-1.6
3,289,219	+		Sama_2750	0.17	+1.2
3,289,219	+		Sama_2750	0.17	+1.4
3,289,219	+		Sama_2750	0.17	-1.0
3,289,219	+		Sama_2750	0.17	+1.3
3,289,219	+		Sama_2750	0.17	-1.7
3,289,219	+		Sama_2750	0.17	+3.3
3,289,219	+		Sama_2750	0.17	-1.8
3,289,220	-		Sama_2750	0.17	-0.9
3,289,220	-		Sama_2750	0.17	-0.9
3,289,220	-		Sama_2750	0.17	-1.5
3,289,220	-		Sama_2750	0.17	+0.2
3,289,220	-		Sama_2750	0.17	-3.0
3,289,220	-		Sama_2750	0.17	+0.4
3,289,220	-		Sama_2750	0.17	+1.2
3,289,220	-		Sama_2750	0.17	-0.2
3,289,220	-		Sama_2750	0.17	+0.2
3,289,220	-		Sama_2750	0.17	+2.5
3,289,223	+		Sama_2750	0.18	+0.9
3,289,223	+		Sama_2750	0.18	+1.1
3,289,224	-		Sama_2750	0.18	+0.2
3,289,224	-		Sama_2750	0.18	-0.5
3,289,258	+		Sama_2750	0.22	+0.5
3,289,258	+		Sama_2750	0.22	-1.6
3,289,258	+		Sama_2750	0.22	+2.3
3,289,258	+		Sama_2750	0.22	-1.2
3,289,259	-		Sama_2750	0.22	+0.7
3,289,259	-		Sama_2750	0.22	-2.7
3,289,278	+		Sama_2750	0.24	+1.2
3,289,278	+		Sama_2750	0.24	-0.1
3,289,278	+		Sama_2750	0.24	-0.6
3,289,278	+		Sama_2750	0.24	+0.1
3,289,278	+		Sama_2750	0.24	-0.9
3,289,278	+		Sama_2750	0.24	-0.7
3,289,279	-		Sama_2750	0.25	+1.0
3,289,279	-		Sama_2750	0.25	+1.7
3,289,279	-		Sama_2750	0.25	-0.2
3,289,279	-		Sama_2750	0.25	+0.3
3,289,279	-		Sama_2750	0.25	-0.2
3,289,289	+		Sama_2750	0.26	-1.6
3,289,290	-		Sama_2750	0.26	+0.8
3,289,376	-		Sama_2750	0.36	+0.4
3,289,376	-		Sama_2750	0.36	-0.2
3,289,434	+		Sama_2750	0.43	+0.3
3,289,434	+		Sama_2750	0.43	-2.5
3,289,435	-		Sama_2750	0.44	-1.0
3,289,505	-		Sama_2750	0.52	+1.4
3,289,505	-		Sama_2750	0.52	+0.9
3,289,505	-		Sama_2750	0.52	+1.4
3,289,560	+		Sama_2750	0.59	-1.5
3,289,560	+		Sama_2750	0.59	-0.6
3,289,561	-		Sama_2750	0.59	-1.6
3,289,599	-		Sama_2750	0.64	+0.4
3,289,602	+		Sama_2750	0.64	-0.4
3,289,602	+		Sama_2750	0.64	-1.4
3,289,602	+		Sama_2750	0.64	+0.2
3,289,603	-		Sama_2750	0.64	+0.2
3,289,610	+		Sama_2750	0.65	-0.4
3,289,610	+		Sama_2750	0.65	+1.4
3,289,610	+		Sama_2750	0.65	-1.2
3,289,610	+		Sama_2750	0.65	+0.2
3,289,611	-		Sama_2750	0.65	+0.2
3,289,611	-		Sama_2750	0.65	+2.1
3,289,632	+		Sama_2750	0.68	+0.9
3,289,632	+		Sama_2750	0.68	-1.1
3,289,632	+		Sama_2750	0.68	+0.9
3,289,632	+		Sama_2750	0.68	+0.0
3,289,632	+		Sama_2750	0.68	+0.2
3,289,633	-		Sama_2750	0.68	+1.2
3,289,633	-		Sama_2750	0.68	+0.2
3,289,633	-		Sama_2750	0.68	+1.0