Strain Fitness in Shewanella amazonensis SB2B around Sama_1506

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,827,120	+		Sama_1505	0.33	+1.8
1,827,120	+		Sama_1505	0.33	-0.1
1,827,121	-		Sama_1505	0.33	+1.5
1,827,137	-		Sama_1505	0.34	+0.5
1,827,201	+		Sama_1505	0.40	-0.5
1,827,235	+		Sama_1505	0.43	-0.1
1,827,236	-		Sama_1505	0.44	-1.2
1,827,239	+		Sama_1505	0.44	-1.9
1,827,239	+		Sama_1505	0.44	-0.5
1,827,240	-		Sama_1505	0.44	-0.1
1,827,240	-		Sama_1505	0.44	+1.0
1,827,240	-		Sama_1505	0.44	-0.6
1,827,240	-		Sama_1505	0.44	+0.1
1,827,299	+		Sama_1505	0.49	+0.4
1,827,309	+		Sama_1505	0.50	+1.9
1,827,410	-		Sama_1505	0.60	-0.5
1,827,462	+		Sama_1505	0.64	-0.1
1,827,479	+		Sama_1505	0.66	-0.4
1,827,494	-		Sama_1505	0.67	+1.5
1,827,500	+		Sama_1505	0.68	+0.1
1,827,500	+		Sama_1505	0.68	-2.7
1,827,501	-		Sama_1505	0.68	+0.6
1,827,501	-		Sama_1505	0.68	+1.1
1,827,501	-		Sama_1505	0.68	-1.2
1,827,507	+		Sama_1505	0.69	+0.4
1,827,507	+		Sama_1505	0.69	+0.4
1,827,507	+		Sama_1505	0.69	+0.7
1,827,508	-		Sama_1505	0.69	+0.3
1,827,508	-		Sama_1505	0.69	-1.0
1,827,508	-		Sama_1505	0.69	+0.7
1,827,574	+		Sama_1505	0.75	-0.4
1,827,575	-		Sama_1505	0.75	+0.6
1,827,575	-		Sama_1505	0.75	+0.2
1,827,681	+		Sama_1505	0.85	-1.1
1,827,681	+		Sama_1505	0.85	-0.3
1,827,681	+		Sama_1505	0.85	-1.2
1,827,681	+		Sama_1505	0.85	-1.5
1,827,682	-		Sama_1505	0.85	-0.5
1,827,714	+		Sama_1505	0.88	+0.6
1,827,836	-				-0.4
1,827,836	-				+0.1
1,827,845	+				-0.0
1,827,845	+				-0.5
1,827,846	-				+0.5
1,827,877	+				+0.2
1,827,878	-				+2.4
1,827,878	-				+1.3
1,827,887	+				-0.5
1,827,887	+				+1.4
1,827,900	+				-0.7
1,827,900	+				+1.5
1,827,900	+				+1.0
1,827,907	+				-1.2
1,827,907	+				-0.4
1,827,907	+				+1.3
1,827,907	+				+0.5
1,827,908	-				-0.9
1,827,908	-				-1.6
1,827,908	-				-0.5
1,827,908	-				-0.2
1,827,968	+				-0.7
1,827,969	-				+2.6
1,828,019	+				+0.8
1,828,019	+				-1.2
1,828,020	-				+0.7
1,828,024	+				+0.3
1,828,025	-				-1.2
1,828,059	+				+0.1
1,828,059	+				+0.3
1,828,059	+				-0.2
1,828,158	+				-0.1
1,828,159	-				-0.9
1,828,159	-				-0.2
1,828,159	-				-0.6
1,828,169	+				+1.9
1,828,251	+				-1.1
1,828,252	-				+0.9
1,828,259	-				-0.1
1,828,259	-				+0.8
1,828,285	-		Sama_1506	0.11	-2.7
1,828,285	-		Sama_1506	0.11	-0.5
1,828,334	+		Sama_1506	0.13	+2.7
1,828,334	+		Sama_1506	0.13	-0.1
1,828,335	-		Sama_1506	0.13	-0.3
1,828,335	-		Sama_1506	0.13	+1.6
1,828,336	+		Sama_1506	0.13	-0.0
1,828,336	+		Sama_1506	0.13	+1.2
1,828,336	+		Sama_1506	0.13	-1.1
1,828,336	+		Sama_1506	0.13	-0.4
1,828,336	+		Sama_1506	0.13	+0.1
1,828,336	+		Sama_1506	0.13	+0.6
1,828,337	-		Sama_1506	0.13	+0.8
1,828,337	-		Sama_1506	0.13	+0.4
1,828,337	-		Sama_1506	0.13	-1.0
1,828,337	-		Sama_1506	0.13	-0.5
1,828,372	+		Sama_1506	0.14	+0.5
1,828,373	-		Sama_1506	0.14	+1.2
1,828,373	-		Sama_1506	0.14	-1.0
1,828,433	+		Sama_1506	0.17	+0.7
1,828,482	-		Sama_1506	0.19	-0.8
1,828,538	-		Sama_1506	0.22	+0.8
1,828,538	-		Sama_1506	0.22	-0.7
1,828,580	+		Sama_1506	0.24	+0.1
1,828,581	-		Sama_1506	0.24	-1.7
1,828,599	-		Sama_1506	0.24	-0.7
1,828,599	-		Sama_1506	0.24	+3.1
1,828,712	+		Sama_1506	0.29	-0.6
1,828,713	-		Sama_1506	0.29	+2.1
1,828,824	+		Sama_1506	0.34	-1.0
1,828,824	+		Sama_1506	0.34	-0.2
1,828,824	+		Sama_1506	0.34	+0.2
1,828,824	+		Sama_1506	0.34	-0.6
1,828,888	-		Sama_1506	0.37	-0.2
1,828,888	-		Sama_1506	0.37	-1.0
1,828,888	-		Sama_1506	0.37	-1.4
1,828,965	+		Sama_1506	0.41	-0.8
1,828,965	+		Sama_1506	0.41	-1.0
1,828,998	+		Sama_1506	0.42	-0.1
1,828,999	-		Sama_1506	0.42	+0.1
1,828,999	-		Sama_1506	0.42	-0.4
1,829,016	-		Sama_1506	0.43	+1.5
1,829,029	+		Sama_1506	0.43	+1.2
1,829,029	+		Sama_1506	0.43	-0.3
1,829,029	+		Sama_1506	0.43	-1.8
1,829,030	-		Sama_1506	0.43	-0.6
1,829,030	-		Sama_1506	0.43	+0.1
1,829,030	-		Sama_1506	0.43	+0.5
1,829,030	-		Sama_1506	0.43	+1.2
1,829,031	+		Sama_1506	0.44	-1.8
1,829,121	+		Sama_1506	0.47	+0.9
1,829,159	+		Sama_1506	0.49	+1.0
1,829,159	+		Sama_1506	0.49	+1.5
1,829,160	-		Sama_1506	0.49	+0.7
1,829,519	+		Sama_1506	0.65	-1.3
1,829,520	-		Sama_1506	0.65	+1.1
1,829,603	+		Sama_1506	0.69	-0.5
1,829,612	+		Sama_1506	0.69	-0.2
1,829,635	+		Sama_1506	0.70	-1.9
1,829,635	+		Sama_1506	0.70	+0.8
1,829,635	+		Sama_1506	0.70	+0.6
1,829,635	+		Sama_1506	0.70	+0.5
1,829,635	+		Sama_1506	0.70	-0.9
1,829,635	+		Sama_1506	0.70	-1.1
1,829,635	+		Sama_1506	0.70	+0.5
1,829,635	+		Sama_1506	0.70	+1.8
1,829,636	-		Sama_1506	0.70	+0.5
1,829,636	-		Sama_1506	0.70	+3.1
1,829,636	-		Sama_1506	0.70	-1.4
1,829,636	-		Sama_1506	0.70	+1.6
1,829,663	-		Sama_1506	0.71	+1.9
1,829,669	+		Sama_1506	0.72	+1.2
1,829,690	-		Sama_1506	0.73	+0.8
1,829,812	+		Sama_1506	0.78	+0.8
1,829,812	+		Sama_1506	0.78	-0.8
1,829,812	+		Sama_1506	0.78	-0.0
1,829,813	-		Sama_1506	0.78	+0.1
1,829,841	-		Sama_1506	0.79	-0.2
1,829,841	-		Sama_1506	0.79	-0.2
1,829,841	-		Sama_1506	0.79	-1.1
1,829,841	-		Sama_1506	0.79	+0.8
1,829,843	+		Sama_1506	0.79	+1.5
1,829,843	+		Sama_1506	0.79	-0.9
1,829,844	-		Sama_1506	0.79	-0.4
1,829,844	-		Sama_1506	0.79	+0.8
1,829,849	+		Sama_1506	0.80	-0.0
1,829,849	+		Sama_1506	0.80	-0.3
1,829,849	+		Sama_1506	0.80	-2.0
1,829,850	-		Sama_1506	0.80	-0.1
1,829,906	+		Sama_1506	0.82	-1.8
1,829,906	+		Sama_1506	0.82	+0.1
1,829,946	+		Sama_1506	0.84	-0.5
1,829,946	+		Sama_1506	0.84	+0.4
1,829,946	+		Sama_1506	0.84	-0.2
1,829,947	-		Sama_1506	0.84	-0.5
1,829,947	-		Sama_1506	0.84	-0.1
1,829,947	-		Sama_1506	0.84	+0.1
1,829,947	-		Sama_1506	0.84	-1.1
1,830,001	+		Sama_1506	0.86	-0.6
1,830,001	+		Sama_1506	0.86	+1.1
1,830,001	+		Sama_1506	0.86	+1.6
1,830,001	+		Sama_1506	0.86	+0.3
1,830,002	-		Sama_1506	0.86	-0.6
1,830,002	-		Sama_1506	0.86	-1.8
1,830,002	-		Sama_1506	0.86	+1.6
1,830,002	-		Sama_1506	0.86	+0.6
1,830,002	-		Sama_1506	0.86	+0.1
1,830,100	-				+1.5
1,830,208	+				-0.4
1,830,208	+				+0.5
1,830,208	+				+1.5
1,830,209	-				-0.1
1,830,209	-				-0.3
1,830,212	+				-1.2
1,830,212	+				+0.3
1,830,212	+				+1.2
1,830,212	+				+0.9
1,830,213	-				+0.5
1,830,213	-				+0.9
1,830,255	+				+0.2
1,830,255	+				-0.3
1,830,256	-				+0.7
1,830,283	+				+1.1
1,830,283	+				-1.7
1,830,283	+				+0.5
1,830,283	+				+0.5
1,830,284	-				-4.1
1,830,284	-				-0.6
1,830,284	-				+1.1
1,830,340	-				-0.5
1,830,370	+				+0.4
1,830,371	-				-0.2
1,830,391	-				-0.0
1,830,407	-				-2.2
1,830,418	+				-0.2
1,830,418	+				-1.2
1,830,418	+				+0.0
1,830,418	+				-0.0
1,830,418	+				-0.4
1,830,419	-				-0.2
1,830,420	+				+0.8
1,830,420	+				-0.4
1,830,421	-				+1.4
1,830,496	+				+0.5
1,830,496	+				+0.1
1,830,496	+				+0.1
1,830,497	-				-0.1
1,830,497	-				+1.5
1,830,516	+				+0.6
1,830,588	-				-2.8
1,830,596	+				+0.5
1,830,596	+				+0.5
1,830,601	+				+0.9
1,830,601	+				-2.2
1,830,601	+				-0.2
1,830,601	+				-0.0
1,830,601	+				-0.9
1,830,602	-				-0.4
1,830,602	-				+0.3
1,830,602	-				-1.4
1,830,602	-				+1.3
1,830,604	-				+0.4
1,830,605	+				+0.0
1,830,605	+				+0.5
1,830,605	+				-0.9
1,830,605	+				-0.4
1,830,605	+				-2.6
1,830,606	-				-0.4
1,830,606	-				-0.9
1,830,669	+		Sama_1507	0.13	-0.4
1,830,670	-		Sama_1507	0.13	-1.3
1,830,670	-		Sama_1507	0.13	+2.0
1,830,670	-		Sama_1507	0.13	+2.3
1,830,702	-		Sama_1507	0.18	-0.2
1,830,770	-		Sama_1507	0.28	+0.3
1,830,945	+		Sama_1507	0.55	+2.0
1,830,945	+		Sama_1507	0.55	+0.8
1,830,945	+		Sama_1507	0.55	-1.6
1,830,945	+		Sama_1507	0.55	-1.2
1,830,945	+		Sama_1507	0.55	-1.1
1,830,945	+		Sama_1507	0.55	+1.1
1,830,946	-		Sama_1507	0.55	-1.1
1,830,946	-		Sama_1507	0.55	-0.5
1,831,014	+		Sama_1507	0.65	-0.7
1,831,014	+		Sama_1507	0.65	-0.7
1,831,137	+		Sama_1507	0.84	-1.9
1,831,137	+		Sama_1507	0.84	+0.0
1,831,137	+		Sama_1507	0.84	-1.1
1,831,138	-		Sama_1507	0.84	+0.6
1,831,138	-		Sama_1507	0.84	+0.4
1,831,159	+		Sama_1507	0.87	-0.2
1,831,160	-		Sama_1507	0.87	+0.1
1,831,162	-		Sama_1507	0.87	-0.6
1,831,241	+				-0.0
1,831,241	+				+0.8
1,831,242	-				+0.4
1,831,256	+				+2.3
1,831,257	-				-0.2
1,831,257	-				+1.4