Strain Fitness in Shewanella amazonensis SB2B around Sama_0837

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,020,192	+		Sama_0836	0.19	-0.3
1,020,241	+		Sama_0836	0.24	-0.5
1,020,241	+		Sama_0836	0.24	+0.2
1,020,241	+		Sama_0836	0.24	-1.4
1,020,241	+		Sama_0836	0.24	-2.2
1,020,242	-		Sama_0836	0.24	-0.2
1,020,242	-		Sama_0836	0.24	+0.0
1,020,304	-		Sama_0836	0.30	+0.8
1,020,396	+		Sama_0836	0.38	-0.6
1,020,467	+		Sama_0836	0.44	+1.0
1,020,467	+		Sama_0836	0.44	+0.7
1,020,468	-		Sama_0836	0.44	+0.4
1,020,468	-		Sama_0836	0.44	-2.4
1,020,736	+		Sama_0836	0.68	-0.3
1,020,736	+		Sama_0836	0.68	+1.4
1,020,736	+		Sama_0836	0.68	+1.8
1,020,736	+		Sama_0836	0.68	-1.6
1,020,737	-		Sama_0836	0.68	-2.6
1,020,741	+		Sama_0836	0.69	+0.5
1,020,741	+		Sama_0836	0.69	+0.7
1,020,741	+		Sama_0836	0.69	-1.0
1,020,742	-		Sama_0836	0.69	+0.1
1,020,742	-		Sama_0836	0.69	+0.5
1,020,796	+		Sama_0836	0.74	-3.5
1,020,843	+		Sama_0836	0.78	-0.1
1,020,870	-		Sama_0836	0.80	+0.8
1,020,870	-		Sama_0836	0.80	-0.6
1,020,916	+		Sama_0836	0.85	-2.1
1,020,917	-		Sama_0836	0.85	+0.8
1,020,917	-		Sama_0836	0.85	+1.4
1,020,917	-		Sama_0836	0.85	+0.4
1,020,917	-		Sama_0836	0.85	+0.4
1,020,932	+		Sama_0836	0.86	-0.4
1,020,932	+		Sama_0836	0.86	-0.6
1,020,933	-		Sama_0836	0.86	-0.1
1,020,933	-		Sama_0836	0.86	+0.2
1,020,933	-		Sama_0836	0.86	-0.8
1,020,933	-		Sama_0836	0.86	+1.7
1,020,933	-		Sama_0836	0.86	-0.3
1,020,982	-				+0.4
1,021,069	+				+1.2
1,021,070	-				+1.5
1,021,185	-				-2.5
1,021,220	+				+1.2
1,021,221	-				+0.1
1,021,221	-				-0.8
1,021,221	-				+0.1
1,021,221	-				-2.4
1,021,231	+				+1.9
1,021,232	-				+0.3
1,021,241	-				+1.3
1,021,241	-				-2.9
1,021,241	-				-1.3
1,021,244	+				+2.0
1,021,244	+				-0.6
1,021,244	+				+0.1
1,021,244	+				+0.9
1,021,244	+				+2.8
1,021,245	-				+0.1
1,021,245	-				-0.2
1,021,245	-				-1.9
1,021,245	-				+1.7
1,021,245	-				-0.1
1,021,245	-				-1.5
1,021,245	-				-0.6
1,021,245	-				+0.7
1,021,245	-				-0.3
1,021,245	-				+0.4
1,021,245	-				+1.1
1,021,245	-				+1.1
1,021,253	+				-0.2
1,021,253	+				+1.1
1,021,254	-				-1.5
1,021,254	-				+1.1
1,021,254	-				-0.3
1,021,297	-		Sama_0837	0.10	+0.0
1,021,414	+		Sama_0837	0.20	-0.3
1,021,414	+		Sama_0837	0.20	-0.0
1,021,414	+		Sama_0837	0.20	+0.8
1,021,414	+		Sama_0837	0.20	-1.7
1,021,415	-		Sama_0837	0.20	+1.8
1,021,415	-		Sama_0837	0.20	+1.0
1,021,415	-		Sama_0837	0.20	-1.1
1,021,415	-		Sama_0837	0.20	+0.5
1,021,415	-		Sama_0837	0.20	+2.1
1,021,525	-		Sama_0837	0.29	+0.8
1,021,525	-		Sama_0837	0.29	-0.6
1,021,525	-		Sama_0837	0.29	-2.3
1,021,525	-		Sama_0837	0.29	-2.4
1,021,525	-		Sama_0837	0.29	-0.9
1,021,568	+		Sama_0837	0.32	-0.6
1,021,568	+		Sama_0837	0.32	+2.8
1,021,568	+		Sama_0837	0.32	+1.6
1,021,568	+		Sama_0837	0.32	+0.8
1,021,569	-		Sama_0837	0.32	-0.2
1,021,569	-		Sama_0837	0.32	+3.0
1,021,569	-		Sama_0837	0.32	-1.4
1,021,569	-		Sama_0837	0.32	+0.1
1,021,584	+		Sama_0837	0.33	-1.3
1,021,584	+		Sama_0837	0.33	-0.6
1,021,585	-		Sama_0837	0.33	-2.3
1,021,585	-		Sama_0837	0.33	+1.7
1,021,586	+		Sama_0837	0.33	+1.6
1,021,586	+		Sama_0837	0.33	+1.1
1,021,586	+		Sama_0837	0.33	-0.7
1,021,586	+		Sama_0837	0.33	+0.1
1,021,586	+		Sama_0837	0.33	-1.3
1,021,587	-		Sama_0837	0.34	+0.3
1,021,587	-		Sama_0837	0.34	-0.6
1,021,627	-		Sama_0837	0.37	+2.4
1,021,726	-		Sama_0837	0.45	+0.9
1,021,726	-		Sama_0837	0.45	-1.4
1,021,763	+		Sama_0837	0.48	+0.2
1,021,763	+		Sama_0837	0.48	+0.3
1,021,764	-		Sama_0837	0.48	+1.7
1,021,764	-		Sama_0837	0.48	+0.3
1,021,854	+		Sama_0837	0.55	-1.6
1,021,863	+		Sama_0837	0.56	+0.2
1,021,882	+		Sama_0837	0.57	-0.9
1,021,882	+		Sama_0837	0.57	+0.7
1,021,882	+		Sama_0837	0.57	-1.1
1,021,882	+		Sama_0837	0.57	+0.1
1,021,883	-		Sama_0837	0.57	+0.6
1,021,883	-		Sama_0837	0.57	+1.2
1,021,883	-		Sama_0837	0.57	+1.4
1,021,883	-		Sama_0837	0.57	+0.9
1,021,883	-		Sama_0837	0.57	+0.1
1,021,883	-		Sama_0837	0.57	+0.9
1,021,915	+		Sama_0837	0.60	+1.5
1,021,915	+		Sama_0837	0.60	+0.5
1,021,929	+		Sama_0837	0.61	+0.4
1,021,962	+		Sama_0837	0.64	+1.1
1,021,995	+		Sama_0837	0.66	-0.5
1,022,045	-		Sama_0837	0.70	+0.2
1,022,070	+		Sama_0837	0.72	-0.7
1,022,071	-		Sama_0837	0.72	-2.5
1,022,128	+		Sama_0837	0.77	-1.4
1,022,172	-		Sama_0837	0.80	-0.1
1,022,262	+		Sama_0837	0.88	-1.0
1,022,262	+		Sama_0837	0.88	-0.9
1,022,262	+		Sama_0837	0.88	-0.8
1,022,262	+		Sama_0837	0.88	-0.8
1,022,262	+		Sama_0837	0.88	-0.4
1,022,262	+		Sama_0837	0.88	-1.4
1,022,262	+		Sama_0837	0.88	+0.4
1,022,263	-		Sama_0837	0.88	+1.1
1,022,307	+				-0.6
1,022,308	-				+0.9
1,022,308	-				-0.3
1,022,308	-				-2.7
1,022,383	+				+0.4
1,022,383	+				+0.7
1,022,406	+				-0.9
1,022,406	+				+0.9
1,022,406	+				-0.9
1,022,407	-				+0.9
1,022,415	+				-0.8
1,022,415	+				-0.2
1,022,416	-				-2.0
1,022,416	-				+0.6
1,022,449	-				+0.5
1,022,459	+				-0.8
1,022,498	-				+1.7
1,022,506	+				+0.8
1,022,512	-				+0.0
1,022,633	+				-0.1
1,022,634	-				+0.5
1,022,672	+				+1.7
1,022,707	+				+1.5
1,022,707	+				-0.5
1,022,707	+				-1.1
1,022,707	+				-0.3
1,022,707	+				+2.4
1,022,707	+				+0.3
1,022,708	-				-2.2
1,022,708	-				-1.6
1,022,708	-				+0.4
1,022,708	-				-2.0
1,022,708	-				-1.9
1,022,708	-				+0.3
1,022,708	-				-0.6
1,022,709	+				+0.2
1,022,709	+				-0.1
1,022,709	+				+1.6
1,022,710	-				+1.2
1,022,710	-				-0.7
1,022,716	+				-2.3
1,022,743	+				+1.3
1,022,787	+				+1.6
1,022,787	+				-1.4
1,022,792	+				+1.7
1,022,792	+				-1.2
1,022,793	-				-0.6
1,022,794	+				-0.8
1,022,813	-				+1.2
1,022,857	+				+0.9
1,022,876	+				+1.6
1,022,883	+				+0.2
1,022,884	-				-0.9
1,022,898	+				-1.0
1,022,957	+		Sama_0838	0.12	+0.2
1,023,089	+		Sama_0838	0.83	+1.4
1,023,089	+		Sama_0838	0.83	-0.6
1,023,089	+		Sama_0838	0.83	+0.8
1,023,089	+		Sama_0838	0.83	+0.4
1,023,090	-		Sama_0838	0.83	+1.3
1,023,118	+				+2.2
1,023,118	+				-0.7
1,023,119	-				-2.0
1,023,119	-				-1.5
1,023,123	+				+1.0
1,023,123	+				+0.8
1,023,188	+				+1.0
1,023,189	-				+0.6
1,023,189	-				+1.4
1,023,263	+				+1.4
1,023,263	+				-0.8
1,023,264	-				-0.8
1,023,264	-				+0.4
1,023,264	-				+1.5
1,023,264	-				+0.7