Strain Fitness in Shewanella amazonensis SB2B around Sama_3595

Experiment: L-Threonine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Threonine (N)
4,226,307	+		Sama_3594	0.14	+0.3
4,226,334	+		Sama_3594	0.16	-0.1
4,226,334	+		Sama_3594	0.16	+0.5
4,226,335	-		Sama_3594	0.16	+0.4
4,226,335	-		Sama_3594	0.16	-0.2
4,226,403	+		Sama_3594	0.22	-1.2
4,226,403	+		Sama_3594	0.22	-0.4
4,226,518	+		Sama_3594	0.32	-1.5
4,226,518	+		Sama_3594	0.32	+0.6
4,226,518	+		Sama_3594	0.32	-2.1
4,226,518	+		Sama_3594	0.32	+2.3
4,226,519	-		Sama_3594	0.33	-1.5
4,226,519	-		Sama_3594	0.33	+0.5
4,226,526	-		Sama_3594	0.33	+1.3
4,226,526	-		Sama_3594	0.33	-1.1
4,226,526	-		Sama_3594	0.33	+0.2
4,226,526	-		Sama_3594	0.33	+0.9
4,226,607	-		Sama_3594	0.40	+0.7
4,226,621	+		Sama_3594	0.42	+1.2
4,226,622	-		Sama_3594	0.42	+0.6
4,226,695	+		Sama_3594	0.48	-0.1
4,226,695	+		Sama_3594	0.48	+0.7
4,226,696	-		Sama_3594	0.48	-0.5
4,226,696	-		Sama_3594	0.48	-0.7
4,226,696	-		Sama_3594	0.48	+0.2
4,226,696	-		Sama_3594	0.48	-0.7
4,226,696	-		Sama_3594	0.48	-1.8
4,226,723	+		Sama_3594	0.51	-2.6
4,226,724	-		Sama_3594	0.51	+1.1
4,226,804	+		Sama_3594	0.58	-1.8
4,226,804	+		Sama_3594	0.58	-2.9
4,226,804	+		Sama_3594	0.58	-1.0
4,226,805	-		Sama_3594	0.58	-0.8
4,226,805	-		Sama_3594	0.58	-2.2
4,226,805	-		Sama_3594	0.58	-0.0
4,226,829	+		Sama_3594	0.60	-1.1
4,226,829	+		Sama_3594	0.60	-0.3
4,226,829	+		Sama_3594	0.60	+0.8
4,226,829	+		Sama_3594	0.60	-0.0
4,226,829	+		Sama_3594	0.60	+0.9
4,226,830	-		Sama_3594	0.60	-0.7
4,226,837	+		Sama_3594	0.61	-0.5
4,226,837	+		Sama_3594	0.61	+0.2
4,226,930	+		Sama_3594	0.69	+1.9
4,226,930	+		Sama_3594	0.69	+0.8
4,226,930	+		Sama_3594	0.69	+0.7
4,226,931	-		Sama_3594	0.69	-2.8
4,226,937	+		Sama_3594	0.69	+1.1
4,226,942	+		Sama_3594	0.70	+0.8
4,226,942	+		Sama_3594	0.70	-0.2
4,226,942	+		Sama_3594	0.70	-0.6
4,226,943	-		Sama_3594	0.70	-0.3
4,226,943	-		Sama_3594	0.70	-1.1
4,226,943	-		Sama_3594	0.70	-0.4
4,226,952	+		Sama_3594	0.71	-1.3
4,226,952	+		Sama_3594	0.71	-0.4
4,226,952	+		Sama_3594	0.71	+1.1
4,226,952	+		Sama_3594	0.71	+0.1
4,226,953	-		Sama_3594	0.71	+0.7
4,226,953	-		Sama_3594	0.71	-0.3
4,226,953	-		Sama_3594	0.71	-1.0
4,226,953	-		Sama_3594	0.71	+0.6
4,226,980	+		Sama_3594	0.73	-1.1
4,226,980	+		Sama_3594	0.73	+0.1
4,226,980	+		Sama_3594	0.73	+0.5
4,226,980	+		Sama_3594	0.73	-0.4
4,226,980	+		Sama_3594	0.73	+0.8
4,226,980	+		Sama_3594	0.73	-1.4
4,226,980	+		Sama_3594	0.73	-0.4
4,226,981	-		Sama_3594	0.73	-0.6
4,226,981	-		Sama_3594	0.73	-1.1
4,226,981	-		Sama_3594	0.73	+0.5
4,226,981	-		Sama_3594	0.73	-1.4
4,226,981	-		Sama_3594	0.73	-1.2
4,226,981	-		Sama_3594	0.73	+0.3
4,226,981	-		Sama_3594	0.73	-1.1
4,226,981	-		Sama_3594	0.73	-0.3
4,226,981	-		Sama_3594	0.73	-1.1
4,226,981	-		Sama_3594	0.73	+1.4
4,227,045	+		Sama_3594	0.79	-0.5
4,227,074	+		Sama_3594	0.82	-2.0
4,227,074	+		Sama_3594	0.82	-0.1
4,227,083	+		Sama_3594	0.82	-0.4
4,227,083	+		Sama_3594	0.82	-0.1
4,227,094	+		Sama_3594	0.83	+0.8
4,227,095	-		Sama_3594	0.83	-0.3
4,227,095	-		Sama_3594	0.83	+0.9
4,227,095	-		Sama_3594	0.83	-1.1
4,227,200	-				+1.5
4,227,227	+				-0.7
4,227,273	-				-0.7
4,227,347	+		Sama_3595	0.11	-1.9
4,227,347	+		Sama_3595	0.11	-0.5
4,227,347	+		Sama_3595	0.11	-1.6
4,227,347	+		Sama_3595	0.11	-0.6
4,227,348	-		Sama_3595	0.11	-0.8
4,227,355	+		Sama_3595	0.12	+0.2
4,227,355	+		Sama_3595	0.12	-0.5
4,227,378	+		Sama_3595	0.16	+0.3
4,227,378	+		Sama_3595	0.16	-1.6
4,227,378	+		Sama_3595	0.16	-0.4
4,227,378	+		Sama_3595	0.16	-0.3
4,227,379	-		Sama_3595	0.16	+0.1
4,227,379	-		Sama_3595	0.16	-1.1
4,227,379	-		Sama_3595	0.16	-0.6
4,227,379	-		Sama_3595	0.16	-0.3
4,227,379	-		Sama_3595	0.16	-0.1
4,227,379	-		Sama_3595	0.16	-3.2
4,227,379	-		Sama_3595	0.16	+0.1
4,227,382	+		Sama_3595	0.17	-0.1
4,227,382	+		Sama_3595	0.17	-2.7
4,227,382	+		Sama_3595	0.17	-0.3
4,227,382	+		Sama_3595	0.17	+0.2
4,227,382	+		Sama_3595	0.17	-0.3
4,227,383	-		Sama_3595	0.17	+0.6
4,227,383	-		Sama_3595	0.17	-1.5
4,227,383	-		Sama_3595	0.17	-0.0
4,227,383	-		Sama_3595	0.17	-1.0
4,227,383	-		Sama_3595	0.17	+1.0
4,227,497	-		Sama_3595	0.36	-0.7
4,227,497	-		Sama_3595	0.36	-0.4
4,227,551	+		Sama_3595	0.45	-0.2
4,227,551	+		Sama_3595	0.45	-0.0
4,227,552	-		Sama_3595	0.45	-0.7
4,227,552	-		Sama_3595	0.45	+0.1
4,227,567	+		Sama_3595	0.48	+0.8
4,227,567	+		Sama_3595	0.48	-1.2
4,227,567	+		Sama_3595	0.48	+2.5
4,227,567	+		Sama_3595	0.48	+0.3
4,227,567	+		Sama_3595	0.48	+0.6
4,227,568	-		Sama_3595	0.48	-1.3
4,227,568	-		Sama_3595	0.48	-0.4
4,227,568	-		Sama_3595	0.48	+1.7
4,227,592	+		Sama_3595	0.52	-0.3
4,227,592	+		Sama_3595	0.52	-0.1
4,227,592	+		Sama_3595	0.52	-0.4
4,227,592	+		Sama_3595	0.52	+0.2
4,227,593	-		Sama_3595	0.52	+1.9
4,227,593	-		Sama_3595	0.52	+0.5
4,227,593	-		Sama_3595	0.52	-0.8
4,227,596	+		Sama_3595	0.53	-0.4
4,227,596	+		Sama_3595	0.53	-0.9
4,227,596	+		Sama_3595	0.53	-0.9
4,227,596	+		Sama_3595	0.53	-0.0
4,227,596	+		Sama_3595	0.53	-1.1
4,227,597	-		Sama_3595	0.53	-0.7
4,227,597	-		Sama_3595	0.53	-0.6
4,227,597	-		Sama_3595	0.53	+0.3
4,227,597	-		Sama_3595	0.53	+0.7
4,227,597	-		Sama_3595	0.53	-1.0
4,227,597	-		Sama_3595	0.53	+0.3
4,227,597	-		Sama_3595	0.53	-0.5
4,227,597	-		Sama_3595	0.53	-1.7
4,227,597	-		Sama_3595	0.53	-3.1
4,227,616	+		Sama_3595	0.56	-3.4
4,227,697	+		Sama_3595	0.70	-0.9
4,227,697	+		Sama_3595	0.70	-1.0
4,227,697	+		Sama_3595	0.70	-0.3
4,227,697	+		Sama_3595	0.70	+1.0
4,227,697	+		Sama_3595	0.70	+1.1
4,227,697	+		Sama_3595	0.70	+1.3
4,227,697	+		Sama_3595	0.70	-1.3
4,227,697	+		Sama_3595	0.70	-0.6
4,227,697	+		Sama_3595	0.70	-1.2
4,227,697	+		Sama_3595	0.70	-2.1
4,227,697	+		Sama_3595	0.70	+0.3
4,227,698	-		Sama_3595	0.70	+0.5
4,227,698	-		Sama_3595	0.70	-1.0
4,227,698	-		Sama_3595	0.70	-1.0
4,227,698	-		Sama_3595	0.70	+0.6
4,227,701	+		Sama_3595	0.70	-0.1
4,227,702	-		Sama_3595	0.71	+0.2
4,227,702	-		Sama_3595	0.71	+0.0
4,227,702	-		Sama_3595	0.71	+0.7
4,227,739	+		Sama_3595	0.77	+1.7
4,227,739	+		Sama_3595	0.77	+1.6
4,227,739	+		Sama_3595	0.77	+1.3
4,227,739	+		Sama_3595	0.77	-0.3
4,227,739	+		Sama_3595	0.77	-1.4
4,227,739	+		Sama_3595	0.77	-0.2
4,227,739	+		Sama_3595	0.77	-0.7
4,227,739	+		Sama_3595	0.77	+0.6
4,227,740	-		Sama_3595	0.77	+0.4
4,227,740	-		Sama_3595	0.77	-0.5
4,227,743	+		Sama_3595	0.77	-0.3
4,227,743	+		Sama_3595	0.77	-0.2
4,227,743	+		Sama_3595	0.77	-1.1
4,227,744	-		Sama_3595	0.78	-0.4
4,227,744	-		Sama_3595	0.78	+0.3
4,227,744	-		Sama_3595	0.78	-1.8
4,227,744	-		Sama_3595	0.78	-0.4
4,227,744	-		Sama_3595	0.78	+0.4
4,227,840	+				+0.3
4,227,840	+				+1.2
4,227,841	-				-2.4
4,227,841	-				-0.3
4,227,841	-				-0.1
4,227,841	-				-1.2
4,227,841	-				-0.4
4,227,901	+				-0.4
4,227,930	+				-0.9
4,227,930	+				-1.8
4,227,931	-				-0.4
4,227,931	-				+1.3
4,227,938	+				-0.3
4,227,938	+				-0.9
4,227,939	-				+0.8
4,227,939	-				-0.2
4,227,939	-				+0.1
4,227,939	-				-0.7
4,227,939	-				+1.5
4,227,939	-				-1.0
4,227,963	+				+1.2
4,227,964	-				-0.5
4,227,965	+				-0.1
4,227,965	+				+0.6
4,227,966	-				+0.0
4,227,981	+				-3.2
4,227,981	+				-0.8
4,227,981	+				-0.7
4,227,981	+				-0.3
4,228,046	+				+0.2
4,228,047	-				-0.8
4,228,047	-				+1.1
4,228,216	+				+0.5
4,228,216	+				-2.0
4,228,216	+				-0.4
4,228,217	-				+0.2
4,228,223	+				-2.2
4,228,223	+				-0.4
4,228,223	+				+0.5
4,228,223	+				-0.2
4,228,224	-				-0.7
4,228,224	-				-0.8
4,228,224	-				-0.5
4,228,224	-				+0.4
4,228,224	-				+1.9
4,228,234	-				-0.0
4,228,258	+				+0.4
4,228,258	+				+1.7
4,228,258	+				-0.4
4,228,259	-				+0.9
4,228,259	-				+1.8
4,228,259	-				-0.2
4,228,259	-				-0.3
4,228,260	-				-2.0
4,228,264	+				+0.3
4,228,264	+				-1.7
4,228,264	+				+1.5
4,228,264	+				+0.1
4,228,264	+				+0.2
4,228,264	+				-0.7
4,228,264	+				+3.0
4,228,265	-				+0.5
4,228,265	-				-0.9
4,228,265	-				-0.5
4,228,265	-				+0.6
4,228,265	-				-0.9
4,228,308	+				+0.7
4,228,308	+				-0.7
4,228,308	+				+0.0
4,228,308	+				+0.1
4,228,309	-				-0.6
4,228,309	-				+0.5
4,228,309	-				+0.6
4,228,309	-				+0.1
4,228,309	-				-0.3
4,228,309	-				-1.1
4,228,309	-				+0.9
4,228,309	-				+0.2
4,228,309	-				+0.3
4,228,309	-				+0.9
4,228,310	+				-0.5
4,228,310	+				+1.4
4,228,310	+				-0.8
4,228,311	-				-1.1
4,228,311	-				-1.8
4,228,311	-				-0.9
4,228,311	-				-1.9
4,228,311	-				+0.2
4,228,335	+				+0.9
4,228,336	-				-0.4
4,228,386	-		Sama_3596	0.10	+1.8
4,228,470	+		Sama_3596	0.13	+1.1
4,228,470	+		Sama_3596	0.13	+0.3
4,228,470	+		Sama_3596	0.13	+1.6
4,228,470	+		Sama_3596	0.13	+2.1
4,228,470	+		Sama_3596	0.13	+1.8
4,228,471	-		Sama_3596	0.13	+0.4
4,228,471	-		Sama_3596	0.13	-1.4
4,228,471	-		Sama_3596	0.13	+1.1
4,228,471	-		Sama_3596	0.13	+1.1
4,228,490	+		Sama_3596	0.14	-0.5
4,228,490	+		Sama_3596	0.14	+0.0
4,228,589	-		Sama_3596	0.18	-0.7
4,228,670	+		Sama_3596	0.21	-0.7
4,228,670	+		Sama_3596	0.21	+1.5
4,228,670	+		Sama_3596	0.21	+3.0
4,228,670	+		Sama_3596	0.21	-0.5
4,228,670	+		Sama_3596	0.21	+1.8
4,228,670	+		Sama_3596	0.21	-1.1
4,228,670	+		Sama_3596	0.21	+1.8
4,228,670	+		Sama_3596	0.21	+0.6
4,228,670	+		Sama_3596	0.21	-1.2
4,228,670	+		Sama_3596	0.21	-0.4
4,228,670	+		Sama_3596	0.21	-0.5
4,228,670	+		Sama_3596	0.21	+0.6
4,228,670	+		Sama_3596	0.21	+1.7
4,228,670	+		Sama_3596	0.21	-0.9
4,228,670	+		Sama_3596	0.21	-1.4
4,228,671	-		Sama_3596	0.21	-1.1
4,228,671	-		Sama_3596	0.21	-0.5
4,228,671	-		Sama_3596	0.21	-1.0
4,228,671	-		Sama_3596	0.21	-0.5
4,228,671	-		Sama_3596	0.21	-1.9
4,228,671	-		Sama_3596	0.21	+0.0
4,228,671	-		Sama_3596	0.21	+1.5
4,228,671	-		Sama_3596	0.21	-1.7
4,228,671	-		Sama_3596	0.21	+0.3
4,228,671	-		Sama_3596	0.21	-0.6
4,228,671	-		Sama_3596	0.21	+0.1
4,228,671	-		Sama_3596	0.21	+1.1
4,228,671	-		Sama_3596	0.21	-0.7
4,228,671	-		Sama_3596	0.21	+0.0
4,228,671	-		Sama_3596	0.21	+1.1
4,228,674	+		Sama_3596	0.21	+1.9
4,228,674	+		Sama_3596	0.21	-0.3
4,228,674	+		Sama_3596	0.21	+0.3
4,228,675	-		Sama_3596	0.21	+0.2
4,228,675	-		Sama_3596	0.21	+0.5
4,228,675	-		Sama_3596	0.21	+0.1
4,228,675	-		Sama_3596	0.21	+0.7
4,228,675	-		Sama_3596	0.21	-0.9
4,228,690	+		Sama_3596	0.21	+1.5
4,228,690	+		Sama_3596	0.21	+0.6
4,228,691	-		Sama_3596	0.21	-1.0
4,228,743	+		Sama_3596	0.23	+3.8
4,228,752	+		Sama_3596	0.24	-1.2
4,228,752	+		Sama_3596	0.24	-1.1
4,228,752	+		Sama_3596	0.24	-1.4
4,228,752	+		Sama_3596	0.24	-0.7
4,228,753	-		Sama_3596	0.24	+0.1
4,228,753	-		Sama_3596	0.24	-1.1
4,228,753	-		Sama_3596	0.24	-0.3
4,228,753	-		Sama_3596	0.24	+0.2
4,228,753	-		Sama_3596	0.24	+0.3
4,228,753	-		Sama_3596	0.24	-1.2
4,228,753	-		Sama_3596	0.24	-1.9
4,228,875	+		Sama_3596	0.28	+0.2
4,228,875	+		Sama_3596	0.28	-1.8
4,228,875	+		Sama_3596	0.28	-0.3
4,228,875	+		Sama_3596	0.28	-1.4
4,228,875	+		Sama_3596	0.28	-1.7
4,228,875	+		Sama_3596	0.28	-1.4
4,228,875	+		Sama_3596	0.28	-2.0
4,228,875	+		Sama_3596	0.28	+0.0
4,228,875	+		Sama_3596	0.28	-0.9
4,228,876	-		Sama_3596	0.28	-0.7
4,228,876	-		Sama_3596	0.28	-0.4
4,228,876	-		Sama_3596	0.28	+0.5
4,228,876	-		Sama_3596	0.28	-0.1
4,228,876	-		Sama_3596	0.28	+0.1
4,228,876	-		Sama_3596	0.28	+0.9
4,228,876	-		Sama_3596	0.28	-0.7
4,228,876	-		Sama_3596	0.28	-0.4
4,228,877	+		Sama_3596	0.28	+0.8
4,228,877	+		Sama_3596	0.28	+0.9
4,228,877	+		Sama_3596	0.28	+0.3
4,228,877	+		Sama_3596	0.28	+0.4
4,228,877	+		Sama_3596	0.28	-1.1