Experiment: m.b. Tetracycline 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_699 and HP15_700 are separated by 2 nucleotides HP15_700 and HP15_701 overlap by 4 nucleotides HP15_701 and HP15_702 are separated by 273 nucleotides HP15_702 and HP15_703 are separated by 469 nucleotides
HP15_699: HP15_699 - conserved hypothetical protein, at 708,898 to 710,031
_699
HP15_700: HP15_700 - hypothetical protein, at 710,034 to 710,192
_700
HP15_701: HP15_701 - hypothetical protein, at 710,189 to 710,449
_701
HP15_702: HP15_702 - conserved hypothetical protein, at 710,723 to 711,118
_702
HP15_703: HP15_703 - phage integrase, at 711,588 to 712,454
_703
Position (kb) 710
711
712 Strain fitness (log2 ratio) -1
0
1
2 at 709.793 kb on - strand, within HP15_699 at 709.858 kb on + strand, within HP15_699 at 709.866 kb on - strand, within HP15_699 at 709.895 kb on - strand, within HP15_699 at 709.919 kb on - strand at 709.924 kb on - strand at 709.969 kb on + strand at 709.994 kb on - strand at 710.059 kb on + strand, within HP15_700 at 710.193 kb on + strand at 710.201 kb on - strand at 710.269 kb on - strand, within HP15_701 at 710.435 kb on - strand at 710.524 kb on + strand at 710.532 kb on - strand at 710.753 kb on - strand at 710.755 kb on + strand at 710.939 kb on - strand, within HP15_702 at 710.949 kb on - strand, within HP15_702 at 710.956 kb on - strand, within HP15_702 at 710.956 kb on - strand, within HP15_702 at 710.980 kb on + strand, within HP15_702 at 710.995 kb on - strand, within HP15_702 at 711.019 kb on - strand, within HP15_702 at 711.038 kb on - strand, within HP15_702 at 711.059 kb on + strand, within HP15_702 at 711.067 kb on - strand, within HP15_702 at 711.144 kb on + strand at 711.162 kb on - strand at 711.265 kb on + strand at 711.461 kb on - strand at 711.537 kb on + strand at 711.582 kb on - strand at 711.613 kb on - strand at 711.854 kb on - strand, within HP15_703 at 711.856 kb on + strand, within HP15_703 at 711.861 kb on + strand, within HP15_703 at 711.861 kb on + strand, within HP15_703 at 711.874 kb on - strand, within HP15_703 at 711.904 kb on - strand, within HP15_703 at 712.064 kb on + strand, within HP15_703
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.0125 mg/ml remove 709,793 - HP15_699 0.79 +0.1 709,858 + HP15_699 0.85 -0.1 709,866 - HP15_699 0.85 -0.6 709,895 - HP15_699 0.88 +0.5 709,919 - +0.6 709,924 - +1.1 709,969 + -0.9 709,994 - +1.3 710,059 + HP15_700 0.16 -0.4 710,193 + -1.2 710,201 - -0.0 710,269 - HP15_701 0.31 -0.8 710,435 - +2.2 710,524 + +0.2 710,532 - +0.2 710,753 - -0.9 710,755 + +1.6 710,939 - HP15_702 0.55 -0.5 710,949 - HP15_702 0.57 -0.5 710,956 - HP15_702 0.59 -0.3 710,956 - HP15_702 0.59 +0.2 710,980 + HP15_702 0.65 -1.1 710,995 - HP15_702 0.69 +1.2 711,019 - HP15_702 0.75 -0.7 711,038 - HP15_702 0.80 -0.6 711,059 + HP15_702 0.85 -0.8 711,067 - HP15_702 0.87 -0.0 711,144 + +0.1 711,162 - -0.2 711,265 + +1.6 711,461 - +0.2 711,537 + +0.2 711,582 - -1.1 711,613 - +0.3 711,854 - HP15_703 0.31 +0.3 711,856 + HP15_703 0.31 +2.6 711,861 + HP15_703 0.31 +0.6 711,861 + HP15_703 0.31 +0.4 711,874 - HP15_703 0.33 +0.4 711,904 - HP15_703 0.36 -0.5 712,064 + HP15_703 0.55 -1.7
Or see this region's nucleotide sequence