Strain Fitness in Marinobacter adhaerens HP15 around HP15_3880

Experiment: m.b. Tetracycline 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.0125 mg/ml
4,106,980	+				+0.0
4,106,980	+				-0.0
4,106,988	-				-0.6
4,106,988	-				+0.8
4,107,048	-				+1.0
4,107,089	-				+1.3
4,107,180	+				-0.1
4,107,209	-				+0.2
4,107,342	-				+0.6
4,107,427	-		HP15_3879	0.26	-0.7
4,107,455	+		HP15_3879	0.35	+0.7
4,107,455	+		HP15_3879	0.35	+1.2
4,107,463	-		HP15_3879	0.37	+0.8
4,107,463	-		HP15_3879	0.37	-0.6
4,107,463	-		HP15_3879	0.37	-1.6
4,107,463	-		HP15_3879	0.37	+0.2
4,107,543	+		HP15_3879	0.62	+0.0
4,107,561	+		HP15_3879	0.68	+0.1
4,107,569	-		HP15_3879	0.70	-1.0
4,107,908	+				-1.2
4,107,916	-				+0.4
4,107,916	-				-0.6
4,107,916	-				+1.3
4,107,942	+				+0.7
4,107,942	+				+0.2
4,108,005	-				+0.1
4,108,016	+				-0.2
4,108,090	+				-0.2
4,108,098	-				+0.1
4,108,098	-				-0.6
4,108,127	+				+0.5
4,108,135	-				-0.6
4,108,182	+		HP15_3880	0.11	+0.4
4,108,210	+		HP15_3880	0.12	-0.6
4,108,266	-		HP15_3880	0.15	+0.3
4,108,373	+		HP15_3880	0.19	-0.2
4,108,387	+		HP15_3880	0.19	-0.7
4,108,414	-		HP15_3880	0.21	-0.6
4,108,444	+		HP15_3880	0.22	-1.4
4,108,454	+		HP15_3880	0.22	+0.2
4,108,454	+		HP15_3880	0.22	-0.5
4,108,454	+		HP15_3880	0.22	+0.9
4,108,454	+		HP15_3880	0.22	+0.8
4,108,462	-		HP15_3880	0.22	+0.4
4,108,493	+		HP15_3880	0.24	+0.2
4,108,495	+		HP15_3880	0.24	+0.1
4,108,496	-		HP15_3880	0.24	-1.2
4,108,496	-		HP15_3880	0.24	+1.1
4,108,518	+		HP15_3880	0.25	-0.7
4,108,585	+		HP15_3880	0.27	+0.2
4,108,588	-		HP15_3880	0.27	-0.2
4,108,590	+		HP15_3880	0.28	+0.9
4,108,653	+		HP15_3880	0.30	-0.3
4,108,759	-		HP15_3880	0.34	+0.5
4,108,800	-		HP15_3880	0.36	-1.0
4,108,858	+		HP15_3880	0.38	+0.0
4,108,861	-		HP15_3880	0.38	+0.0
4,108,890	-		HP15_3880	0.40	-1.4
4,108,893	+		HP15_3880	0.40	-0.5
4,108,925	-		HP15_3880	0.41	-0.2
4,108,949	-		HP15_3880	0.42	-2.7
4,108,978	-		HP15_3880	0.43	+0.2
4,109,000	+		HP15_3880	0.44	-0.6
4,109,061	+		HP15_3880	0.46	-0.4
4,109,072	+		HP15_3880	0.47	-0.1
4,109,077	+		HP15_3880	0.47	-0.5
4,109,116	-		HP15_3880	0.49	-0.5
4,109,389	+		HP15_3880	0.59	+0.1
4,109,391	+		HP15_3880	0.59	-2.9
4,109,391	+		HP15_3880	0.59	-0.7
4,109,399	-		HP15_3880	0.60	-0.3
4,109,455	+		HP15_3880	0.62	+1.3
4,109,497	-		HP15_3880	0.64	+0.7
4,109,507	+		HP15_3880	0.64	+0.2
4,109,507	+		HP15_3880	0.64	-0.8
4,109,520	+		HP15_3880	0.65	-0.8
4,109,537	-		HP15_3880	0.65	-0.2
4,109,574	+		HP15_3880	0.67	-0.1
4,109,593	+		HP15_3880	0.68	+0.6
4,109,625	+		HP15_3880	0.69	-0.2
4,109,671	-		HP15_3880	0.71	+0.2
4,109,731	-		HP15_3880	0.73	-0.2
4,109,814	+		HP15_3880	0.76	-1.4
4,109,905	+		HP15_3880	0.80	+0.3
4,109,960	-		HP15_3880	0.82	-1.4
4,110,127	+		HP15_3880	0.89	-0.6
4,110,201	-				-1.0
4,110,205	+				-0.1
4,110,213	-				-1.4
4,110,519	-				+0.3
4,110,669	-				+0.1
4,110,746	+				+0.5
4,110,748	-				-0.4
4,110,779	-				-0.9
4,110,783	+				-0.2
4,110,791	-				-1.3
4,110,791	-				+1.1
4,111,072	+		HP15_3881	0.23	-0.6
4,111,072	+		HP15_3881	0.23	-0.4
4,111,115	+		HP15_3881	0.27	-0.2
4,111,123	-		HP15_3881	0.27	-0.3
4,111,186	+		HP15_3881	0.32	-1.3
4,111,298	+		HP15_3881	0.41	-1.9