Experiment: m.b. Tetracycline 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_345 and HP15_346 are separated by 34 nucleotides HP15_346 and HP15_347 are separated by 439 nucleotides
HP15_345: HP15_345 - tetratricopeptide TPR_4-containing protein, at 339,446 to 340,768
_345
HP15_346: HP15_346 - triacylglycerol lipase, at 340,803 to 341,606
_346
HP15_347: HP15_347 - glutamate-1-semialdehyde 2,1-aminomutase, at 342,046 to 343,326
_347
Position (kb) 340
341
342 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 339.805 kb on + strand, within HP15_345 at 339.813 kb on - strand, within HP15_345 at 339.966 kb on - strand, within HP15_345 at 340.114 kb on - strand, within HP15_345 at 340.124 kb on + strand, within HP15_345 at 340.134 kb on + strand, within HP15_345 at 340.137 kb on - strand, within HP15_345 at 340.142 kb on - strand at 340.142 kb on - strand, within HP15_345 at 340.208 kb on + strand, within HP15_345 at 340.234 kb on + strand, within HP15_345 at 340.234 kb on + strand, within HP15_345 at 340.269 kb on + strand, within HP15_345 at 340.287 kb on - strand, within HP15_345 at 340.469 kb on + strand, within HP15_345 at 340.474 kb on + strand, within HP15_345 at 340.552 kb on - strand, within HP15_345 at 340.562 kb on - strand, within HP15_345 at 340.649 kb on + strand at 340.659 kb on + strand at 340.677 kb on - strand at 340.717 kb on + strand at 340.761 kb on - strand at 340.782 kb on + strand at 340.972 kb on - strand, within HP15_346 at 341.016 kb on - strand, within HP15_346 at 341.118 kb on + strand, within HP15_346 at 341.160 kb on + strand, within HP15_346 at 341.160 kb on + strand, within HP15_346 at 341.163 kb on - strand, within HP15_346 at 341.168 kb on - strand, within HP15_346 at 341.175 kb on - strand, within HP15_346 at 341.195 kb on + strand, within HP15_346 at 341.201 kb on + strand, within HP15_346 at 341.336 kb on + strand, within HP15_346 at 341.426 kb on + strand, within HP15_346 at 341.440 kb on + strand, within HP15_346 at 341.506 kb on - strand, within HP15_346 at 341.542 kb on - strand at 341.639 kb on + strand at 341.647 kb on - strand at 341.677 kb on - strand at 341.679 kb on + strand at 341.687 kb on - strand at 341.818 kb on - strand at 341.818 kb on - strand at 341.920 kb on + strand at 341.958 kb on - strand at 341.985 kb on + strand at 342.020 kb on - strand at 342.035 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.0125 mg/ml remove 339,805 + HP15_345 0.27 -0.3 339,813 - HP15_345 0.28 -0.6 339,966 - HP15_345 0.39 -3.3 340,114 - HP15_345 0.50 +1.0 340,124 + HP15_345 0.51 -1.5 340,134 + HP15_345 0.52 -0.6 340,137 - HP15_345 0.52 -0.1 340,142 - -0.3 340,142 - HP15_345 0.53 -0.2 340,208 + HP15_345 0.58 +1.8 340,234 + HP15_345 0.60 -2.1 340,234 + HP15_345 0.60 +1.0 340,269 + HP15_345 0.62 -0.2 340,287 - HP15_345 0.64 -0.0 340,469 + HP15_345 0.77 +0.0 340,474 + HP15_345 0.78 -1.7 340,552 - HP15_345 0.84 +0.5 340,562 - HP15_345 0.84 +0.2 340,649 + -1.4 340,659 + +1.3 340,677 - -0.5 340,717 + +0.2 340,761 - -0.4 340,782 + -0.0 340,972 - HP15_346 0.21 -1.2 341,016 - HP15_346 0.26 -1.2 341,118 + HP15_346 0.39 -1.0 341,160 + HP15_346 0.44 -0.8 341,160 + HP15_346 0.44 -0.3 341,163 - HP15_346 0.45 -0.0 341,168 - HP15_346 0.45 +1.0 341,175 - HP15_346 0.46 -0.9 341,195 + HP15_346 0.49 -0.5 341,201 + HP15_346 0.50 +0.1 341,336 + HP15_346 0.66 -0.2 341,426 + HP15_346 0.77 -0.3 341,440 + HP15_346 0.79 -1.5 341,506 - HP15_346 0.87 +0.6 341,542 - +0.6 341,639 + +0.3 341,647 - +0.9 341,677 - -0.8 341,679 + +1.1 341,687 - +1.0 341,818 - -0.6 341,818 - +1.8 341,920 + +0.7 341,958 - +0.3 341,985 + -0.3 342,020 - +0.1 342,035 - -0.3
Or see this region's nucleotide sequence