Strain Fitness in Shewanella amazonensis SB2B around Sama_3147

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
3,734,483	+		Sama_3146	0.59	+1.0
3,734,484	-		Sama_3146	0.59	-1.6
3,734,564	+		Sama_3146	0.63	-0.7
3,734,564	+		Sama_3146	0.63	+0.5
3,734,564	+		Sama_3146	0.63	-0.1
3,734,682	-		Sama_3146	0.70	-0.3
3,734,682	-		Sama_3146	0.70	+0.1
3,734,777	+		Sama_3146	0.76	-0.3
3,734,778	-		Sama_3146	0.76	+1.4
3,734,813	+		Sama_3146	0.78	+0.3
3,734,813	+		Sama_3146	0.78	-0.9
3,734,813	+		Sama_3146	0.78	+1.0
3,734,813	+		Sama_3146	0.78	-2.6
3,734,813	+		Sama_3146	0.78	+0.7
3,734,814	-		Sama_3146	0.78	-0.2
3,734,814	-		Sama_3146	0.78	+0.4
3,734,814	-		Sama_3146	0.78	+0.8
3,734,814	-		Sama_3146	0.78	+0.3
3,734,814	-		Sama_3146	0.78	-1.1
3,734,814	-		Sama_3146	0.78	-2.1
3,734,851	+		Sama_3146	0.80	+1.9
3,734,961	+		Sama_3146	0.87	+0.6
3,734,961	+		Sama_3146	0.87	+1.6
3,734,962	-		Sama_3146	0.87	+0.1
3,734,962	-		Sama_3146	0.87	-0.6
3,734,978	+		Sama_3146	0.88	-1.2
3,734,979	-		Sama_3146	0.88	-0.7
3,734,979	-		Sama_3146	0.88	+3.7
3,735,015	+				-1.2
3,735,016	-				-0.1
3,735,016	-				+0.3
3,735,017	+				+0.2
3,735,018	-				+0.4
3,735,132	+				-2.6
3,735,141	+				+1.5
3,735,141	+				+0.1
3,735,141	+				-1.1
3,735,142	-				+1.3
3,735,142	-				+2.1
3,735,142	-				+2.6
3,735,142	-				-0.4
3,735,142	-				-2.6
3,735,142	-				+0.3
3,735,142	-				+0.1
3,735,142	-				-0.5
3,735,168	-				-0.2
3,735,168	-				+0.3
3,735,179	+				+1.1
3,735,179	+				+0.9
3,735,180	-				+4.4
3,735,180	-				+0.1
3,735,180	-				-0.7
3,735,180	-				-1.3
3,735,180	-				+1.2
3,735,180	-				+0.3
3,735,197	-				-0.8
3,735,201	+				-0.7
3,735,201	+				+0.6
3,735,201	+				-2.2
3,735,202	-				-0.3
3,735,202	-				-0.8
3,735,202	-				-0.8
3,735,216	+				+0.1
3,735,216	+				+0.0
3,735,217	-				+0.5
3,735,217	-				-0.9
3,735,256	+				+3.3
3,735,256	+				-0.9
3,735,256	+				-0.7
3,735,257	-				-0.6
3,735,257	-				+0.5
3,735,275	-				-1.5
3,735,295	+				-0.3
3,735,296	-				+5.4
3,735,296	-				-0.9
3,735,296	-				+0.8
3,735,296	-				-0.5
3,735,382	+				+0.4
3,735,383	-				-0.7
3,735,383	-				-1.0
3,735,452	+		Sama_3147	0.11	+0.9
3,735,452	+		Sama_3147	0.11	+0.5
3,735,453	-		Sama_3147	0.12	-0.8
3,735,453	-		Sama_3147	0.12	+1.0
3,735,490	+		Sama_3147	0.16	+0.2
3,735,494	+		Sama_3147	0.16	-0.0
3,735,494	+		Sama_3147	0.16	-0.5
3,735,494	+		Sama_3147	0.16	-2.3
3,735,494	+		Sama_3147	0.16	+0.0
3,735,494	+		Sama_3147	0.16	-0.2
3,735,494	+		Sama_3147	0.16	-0.1
3,735,495	-		Sama_3147	0.16	+0.3
3,735,495	-		Sama_3147	0.16	+2.1
3,735,495	-		Sama_3147	0.16	-0.2
3,735,495	-		Sama_3147	0.16	-1.2
3,735,495	-		Sama_3147	0.16	-0.1
3,735,495	-		Sama_3147	0.16	+2.4
3,735,495	-		Sama_3147	0.16	+0.1
3,735,620	+		Sama_3147	0.30	+1.1
3,735,620	+		Sama_3147	0.30	+0.3
3,735,620	+		Sama_3147	0.30	+0.7
3,735,620	+		Sama_3147	0.30	+0.2
3,735,620	+		Sama_3147	0.30	-0.0
3,735,621	-		Sama_3147	0.30	+2.5
3,735,621	-		Sama_3147	0.30	-0.5
3,735,632	+		Sama_3147	0.32	-0.2
3,735,632	+		Sama_3147	0.32	-1.4
3,735,632	+		Sama_3147	0.32	-0.2
3,735,632	+		Sama_3147	0.32	-0.9
3,735,632	+		Sama_3147	0.32	-1.0
3,735,633	-		Sama_3147	0.32	+0.7
3,735,698	+		Sama_3147	0.39	-0.5
3,735,698	+		Sama_3147	0.39	+1.2
3,735,699	-		Sama_3147	0.39	-0.8
3,735,699	-		Sama_3147	0.39	-0.8
3,735,767	+		Sama_3147	0.47	-0.4
3,735,767	+		Sama_3147	0.47	-0.7
3,735,767	+		Sama_3147	0.47	+5.4
3,735,767	+		Sama_3147	0.47	-0.2
3,735,774	+		Sama_3147	0.48	-0.8
3,735,775	-		Sama_3147	0.48	-1.4
3,735,792	+		Sama_3147	0.50	-1.0
3,735,792	+		Sama_3147	0.50	+0.2
3,735,793	-		Sama_3147	0.50	+0.4
3,735,807	+		Sama_3147	0.51	+0.2
3,735,807	+		Sama_3147	0.51	-2.2
3,735,807	+		Sama_3147	0.51	-0.3
3,735,808	-		Sama_3147	0.51	+1.1
3,735,817	+		Sama_3147	0.52	+0.6
3,735,879	+		Sama_3147	0.59	+0.6
3,735,879	+		Sama_3147	0.59	+0.6
3,735,879	+		Sama_3147	0.59	+0.9
3,735,880	-		Sama_3147	0.59	+1.3
3,735,880	-		Sama_3147	0.59	-0.6
3,736,033	+		Sama_3147	0.77	-0.1
3,736,034	-		Sama_3147	0.77	+0.3
3,736,039	+		Sama_3147	0.77	+0.3
3,736,039	+		Sama_3147	0.77	+0.2
3,736,040	-		Sama_3147	0.77	+1.4
3,736,041	+		Sama_3147	0.78	+0.7
3,736,041	+		Sama_3147	0.78	+0.7
3,736,041	+		Sama_3147	0.78	+0.3
3,736,041	+		Sama_3147	0.78	+0.2
3,736,041	+		Sama_3147	0.78	-0.1
3,736,041	+		Sama_3147	0.78	-0.5
3,736,041	+		Sama_3147	0.78	-0.7
3,736,042	-		Sama_3147	0.78	-0.2
3,736,042	-		Sama_3147	0.78	-0.1
3,736,042	-		Sama_3147	0.78	+5.9
3,736,080	+		Sama_3147	0.82	-0.1
3,736,080	+		Sama_3147	0.82	-0.8
3,736,080	+		Sama_3147	0.82	-1.4
3,736,081	-		Sama_3147	0.82	-1.1
3,736,081	-		Sama_3147	0.82	-1.4
3,736,082	+		Sama_3147	0.82	+0.9
3,736,082	+		Sama_3147	0.82	+1.3
3,736,082	+		Sama_3147	0.82	-1.1
3,736,083	-		Sama_3147	0.82	+0.1
3,736,083	-		Sama_3147	0.82	-1.5
3,736,083	-		Sama_3147	0.82	-0.8
3,736,083	-		Sama_3147	0.82	+0.1
3,736,083	-		Sama_3147	0.82	+0.7
3,736,083	-		Sama_3147	0.82	+0.6
3,736,141	+		Sama_3147	0.89	+0.1
3,736,141	+		Sama_3147	0.89	-1.4
3,736,147	+		Sama_3147	0.89	+0.3
3,736,148	-		Sama_3147	0.90	+0.3
3,736,150	+		Sama_3147	0.90	+1.6
3,736,151	-		Sama_3147	0.90	+0.3
3,736,151	-		Sama_3147	0.90	+2.2
3,736,174	+				+1.8
3,736,174	+				+0.7
3,736,174	+				+3.3
3,736,174	+				+1.1
3,736,174	+				-0.7
3,736,174	+				+0.4
3,736,176	+				+0.7
3,736,176	+				-1.5
3,736,176	+				+2.1
3,736,176	+				-1.1
3,736,176	+				-0.7
3,736,176	+				+0.1
3,736,176	+				-1.8
3,736,176	+				+0.4
3,736,176	+				+0.7
3,736,176	+				+1.2
3,736,176	+				+2.4
3,736,176	+				-0.3
3,736,177	-				-1.3
3,736,177	-				+1.1
3,736,177	-				-0.2
3,736,177	-				+0.9
3,736,177	-				-2.3
3,736,177	-				+0.2
3,736,177	-				-0.7
3,736,177	-				+1.5
3,736,183	+				+0.6
3,736,183	+				-0.7
3,736,183	+				-2.4
3,736,183	+				+0.2
3,736,184	-				-0.3
3,736,247	+				-0.1
3,736,248	-				-0.4
3,736,248	-				+0.5
3,736,280	-				+1.7
3,736,294	+				+0.5
3,736,294	+				+0.8
3,736,294	+				-1.3
3,736,309	+				-0.4
3,736,326	+				-0.6
3,736,326	+				-1.0
3,736,326	+				-0.3
3,736,326	+				+1.5
3,736,326	+				+0.3
3,736,326	+				+0.7
3,736,327	-				+0.7
3,736,327	-				-0.4
3,736,327	-				+0.2
3,736,327	-				-0.7
3,736,362	-				+0.6
3,736,362	-				-0.1
3,736,362	-				-0.2
3,736,482	+		Sama_3148	0.13	+0.5
3,736,483	-		Sama_3148	0.14	-1.5
3,736,497	+		Sama_3148	0.15	+0.1
3,736,498	-		Sama_3148	0.15	+0.8
3,736,527	+		Sama_3148	0.19	+0.8
3,736,528	-		Sama_3148	0.19	+1.4
3,736,528	-		Sama_3148	0.19	-1.4
3,736,531	+		Sama_3148	0.19	-0.2
3,736,531	+		Sama_3148	0.19	-1.6
3,736,531	+		Sama_3148	0.19	-1.9
3,736,531	+		Sama_3148	0.19	+0.1
3,736,531	+		Sama_3148	0.19	-3.1
3,736,531	+		Sama_3148	0.19	-2.3
3,736,531	+		Sama_3148	0.19	-0.0
3,736,531	+		Sama_3148	0.19	+1.6
3,736,531	+		Sama_3148	0.19	-1.4
3,736,531	+		Sama_3148	0.19	-2.6
3,736,531	+		Sama_3148	0.19	-1.7
3,736,532	-		Sama_3148	0.19	-2.0
3,736,532	-		Sama_3148	0.19	+0.9
3,736,532	-		Sama_3148	0.19	-0.6
3,736,532	-		Sama_3148	0.19	-0.5
3,736,532	-		Sama_3148	0.19	-0.5
3,736,532	-		Sama_3148	0.19	-1.5
3,736,532	-		Sama_3148	0.19	+0.5
3,736,532	-		Sama_3148	0.19	-0.5
3,736,543	+		Sama_3148	0.20	-2.4
3,736,544	-		Sama_3148	0.21	-1.0
3,736,544	-		Sama_3148	0.21	+2.1
3,736,544	-		Sama_3148	0.21	-2.2
3,736,544	-		Sama_3148	0.21	-0.7
3,736,575	+		Sama_3148	0.24	-2.7
3,736,575	+		Sama_3148	0.24	+0.3
3,736,575	+		Sama_3148	0.24	-1.8
3,736,575	+		Sama_3148	0.24	-1.2
3,736,575	+		Sama_3148	0.24	-1.3
3,736,575	+		Sama_3148	0.24	-0.3
3,736,575	+		Sama_3148	0.24	-1.6
3,736,575	+		Sama_3148	0.24	-0.1
3,736,575	+		Sama_3148	0.24	-1.5
3,736,575	+		Sama_3148	0.24	-1.2
3,736,575	+		Sama_3148	0.24	-0.0
3,736,575	+		Sama_3148	0.24	+2.5
3,736,575	+		Sama_3148	0.24	-1.7
3,736,575	+		Sama_3148	0.24	-1.1
3,736,575	+		Sama_3148	0.24	-1.2
3,736,575	+		Sama_3148	0.24	-1.3
3,736,575	+		Sama_3148	0.24	-2.4
3,736,575	+		Sama_3148	0.24	-1.1
3,736,576	-		Sama_3148	0.24	-1.7
3,736,576	-		Sama_3148	0.24	-1.2
3,736,576	-		Sama_3148	0.24	-2.5
3,736,576	-		Sama_3148	0.24	+1.1
3,736,576	-		Sama_3148	0.24	-0.3
3,736,576	-		Sama_3148	0.24	-2.2
3,736,576	-		Sama_3148	0.24	-0.3
3,736,576	-		Sama_3148	0.24	-0.3
3,736,576	-		Sama_3148	0.24	+0.1
3,736,576	-		Sama_3148	0.24	-0.7
3,736,576	-		Sama_3148	0.24	-1.4
3,736,576	-		Sama_3148	0.24	-3.5
3,736,576	-		Sama_3148	0.24	-1.4
3,736,576	-		Sama_3148	0.24	-0.7
3,736,576	-		Sama_3148	0.24	-1.5
3,736,576	-		Sama_3148	0.24	-0.7
3,736,576	-		Sama_3148	0.24	-0.1
3,736,612	-		Sama_3148	0.28	-1.0
3,736,627	+		Sama_3148	0.30	+0.2
3,736,627	+		Sama_3148	0.30	-2.1
3,736,627	+		Sama_3148	0.30	-1.2
3,736,627	+		Sama_3148	0.30	+2.4
3,736,628	-		Sama_3148	0.30	-2.7
3,736,628	-		Sama_3148	0.30	-1.6
3,736,681	-		Sama_3148	0.36	-0.6
3,736,764	+		Sama_3148	0.46	-0.7
3,736,764	+		Sama_3148	0.46	-1.5
3,736,764	+		Sama_3148	0.46	-0.0
3,736,765	-		Sama_3148	0.46	-1.6
3,736,765	-		Sama_3148	0.46	-1.0
3,736,770	-		Sama_3148	0.47	-0.1
3,736,775	+		Sama_3148	0.47	+0.4
3,736,775	+		Sama_3148	0.47	+0.6
3,736,775	+		Sama_3148	0.47	-1.5
3,736,775	+		Sama_3148	0.47	+3.3
3,736,775	+		Sama_3148	0.47	+0.5
3,736,775	+		Sama_3148	0.47	-0.5
3,736,775	+		Sama_3148	0.47	-1.3
3,736,776	-		Sama_3148	0.47	-1.9
3,736,776	-		Sama_3148	0.47	+0.4
3,736,776	-		Sama_3148	0.47	-1.1
3,736,776	-		Sama_3148	0.47	-2.1
3,736,779	+		Sama_3148	0.48	-1.8
3,736,779	+		Sama_3148	0.48	-0.3
3,736,779	+		Sama_3148	0.48	+2.9
3,736,779	+		Sama_3148	0.48	-1.1
3,736,780	-		Sama_3148	0.48	-2.8
3,736,780	-		Sama_3148	0.48	+0.7
3,736,780	-		Sama_3148	0.48	-2.5
3,736,780	-		Sama_3148	0.48	-1.3
3,736,780	-		Sama_3148	0.48	-0.8
3,736,874	-		Sama_3148	0.59	+1.1
3,736,888	+		Sama_3148	0.60	-2.0
3,736,888	+		Sama_3148	0.60	-2.1
3,736,889	-		Sama_3148	0.61	+1.2
3,736,889	-		Sama_3148	0.61	+0.3
3,736,889	-		Sama_3148	0.61	-0.4
3,736,926	+		Sama_3148	0.65	+0.6
3,736,965	+		Sama_3148	0.69	-0.2
3,736,966	-		Sama_3148	0.69	-1.4
3,736,966	-		Sama_3148	0.69	+4.6
3,736,966	-		Sama_3148	0.69	-2.9
3,736,966	-		Sama_3148	0.69	-0.7
3,736,966	-		Sama_3148	0.69	-3.3
3,736,966	-		Sama_3148	0.69	-1.2
3,736,968	+		Sama_3148	0.70	-2.1
3,736,968	+		Sama_3148	0.70	+0.3
3,736,968	+		Sama_3148	0.70	-0.5
3,736,969	-		Sama_3148	0.70	-0.1
3,736,969	-		Sama_3148	0.70	+0.1
3,736,969	-		Sama_3148	0.70	-0.3
3,737,015	+		Sama_3148	0.75	+0.7
3,737,015	+		Sama_3148	0.75	-1.9
3,737,072	+		Sama_3148	0.82	-0.9
3,737,073	-		Sama_3148	0.82	-1.3
3,737,158	-				-1.9
3,737,168	-				-1.8
3,737,168	-				-1.4
3,737,180	+				-0.4
3,737,234	+				+0.8
3,737,234	+				-0.8
3,737,235	-				-1.0
3,737,235	-				-3.2
3,737,235	-				+0.1
3,737,235	-				-1.1