Strain Fitness in Shewanella amazonensis SB2B around Sama_2404

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
2,886,919	+		Sama_2403	0.16	+1.2
2,886,974	+		Sama_2403	0.21	+0.4
2,886,974	+		Sama_2403	0.21	-1.3
2,886,974	+		Sama_2403	0.21	-0.4
2,886,975	-		Sama_2403	0.21	-0.2
2,886,975	-		Sama_2403	0.21	+0.9
2,886,975	-		Sama_2403	0.21	-0.4
2,886,975	-		Sama_2403	0.21	+0.1
2,886,975	-		Sama_2403	0.21	+0.5
2,886,975	-		Sama_2403	0.21	+0.7
2,886,975	-		Sama_2403	0.21	+1.5
2,887,054	+		Sama_2403	0.29	-0.6
2,887,055	-		Sama_2403	0.29	-1.8
2,887,145	+		Sama_2403	0.38	-0.5
2,887,145	+		Sama_2403	0.38	+0.9
2,887,145	+		Sama_2403	0.38	-2.3
2,887,145	+		Sama_2403	0.38	-0.1
2,887,145	+		Sama_2403	0.38	-0.0
2,887,145	+		Sama_2403	0.38	+0.2
2,887,145	+		Sama_2403	0.38	-0.3
2,887,145	+		Sama_2403	0.38	-0.8
2,887,145	+		Sama_2403	0.38	-0.3
2,887,145	+		Sama_2403	0.38	-0.5
2,887,146	-		Sama_2403	0.38	-0.5
2,887,146	-		Sama_2403	0.38	-1.2
2,887,146	-		Sama_2403	0.38	+2.0
2,887,146	-		Sama_2403	0.38	-0.4
2,887,205	+		Sama_2403	0.43	-0.9
2,887,205	+		Sama_2403	0.43	+0.5
2,887,262	-		Sama_2403	0.49	-0.5
2,887,262	-		Sama_2403	0.49	-0.9
2,887,262	-		Sama_2403	0.49	+1.1
2,887,262	-		Sama_2403	0.49	-0.4
2,887,265	+		Sama_2403	0.49	+0.5
2,887,265	+		Sama_2403	0.49	+2.5
2,887,265	+		Sama_2403	0.49	+0.4
2,887,265	+		Sama_2403	0.49	-1.8
2,887,265	+		Sama_2403	0.49	-1.6
2,887,265	+		Sama_2403	0.49	-1.5
2,887,265	+		Sama_2403	0.49	+0.3
2,887,265	+		Sama_2403	0.49	+0.3
2,887,265	+		Sama_2403	0.49	-0.1
2,887,265	+		Sama_2403	0.49	-1.5
2,887,265	+		Sama_2403	0.49	-0.8
2,887,265	+		Sama_2403	0.49	+0.1
2,887,266	-		Sama_2403	0.49	-0.8
2,887,266	-		Sama_2403	0.49	-0.1
2,887,266	-		Sama_2403	0.49	+0.5
2,887,266	-		Sama_2403	0.49	-2.0
2,887,266	-		Sama_2403	0.49	+0.2
2,887,266	-		Sama_2403	0.49	-1.6
2,887,266	-		Sama_2403	0.49	+0.3
2,887,266	-		Sama_2403	0.49	-0.6
2,887,266	-		Sama_2403	0.49	-0.4
2,887,266	-		Sama_2403	0.49	-0.5
2,887,266	-		Sama_2403	0.49	+0.5
2,887,266	-		Sama_2403	0.49	-1.1
2,887,304	+		Sama_2403	0.53	-0.2
2,887,304	+		Sama_2403	0.53	+0.7
2,887,304	+		Sama_2403	0.53	-0.3
2,887,304	+		Sama_2403	0.53	-0.6
2,887,305	-		Sama_2403	0.53	+0.1
2,887,322	+		Sama_2403	0.54	-0.4
2,887,322	+		Sama_2403	0.54	-0.8
2,887,323	-		Sama_2403	0.54	-0.9
2,887,323	-		Sama_2403	0.54	-0.2
2,887,323	-		Sama_2403	0.54	-1.4
2,887,323	-		Sama_2403	0.54	+0.1
2,887,323	-		Sama_2403	0.54	+1.3
2,887,330	+		Sama_2403	0.55	-0.8
2,887,371	-		Sama_2403	0.59	+0.3
2,887,502	+		Sama_2403	0.71	+0.4
2,887,531	+		Sama_2403	0.74	+1.2
2,887,547	+		Sama_2403	0.76	-0.8
2,887,547	+		Sama_2403	0.76	+1.3
2,887,547	+		Sama_2403	0.76	+1.2
2,887,547	+		Sama_2403	0.76	-0.8
2,887,547	+		Sama_2403	0.76	-0.7
2,887,548	-		Sama_2403	0.76	-0.8
2,887,548	-		Sama_2403	0.76	-0.1
2,887,558	+		Sama_2403	0.77	+1.3
2,887,559	-		Sama_2403	0.77	-1.3
2,887,626	-		Sama_2403	0.83	-1.6
2,887,692	-		Sama_2403	0.89	-1.7
2,887,716	+				-1.0
2,887,717	-				+0.5
2,887,717	-				+2.0
2,887,751	+				-0.6
2,887,751	+				+0.7
2,887,751	+				+0.5
2,887,751	+				+0.2
2,887,751	+				+0.1
2,887,752	-				+0.8
2,887,752	-				+0.0
2,887,782	+				+0.2
2,887,782	+				-0.0
2,887,782	+				+0.5
2,887,782	+				+1.1
2,887,783	-				-0.7
2,887,789	+				-0.4
2,887,789	+				-1.2
2,887,789	+				-1.1
2,887,789	+				-0.8
2,887,789	+				-0.2
2,887,789	+				+0.2
2,887,789	+				-0.4
2,887,789	+				-1.0
2,887,789	+				-0.8
2,887,790	-				+1.0
2,887,790	-				-0.7
2,887,790	-				-0.8
2,887,790	-				+0.8
2,887,790	-				-0.3
2,887,790	-				+1.4
2,887,790	-				-1.0
2,887,790	-				-1.2
2,887,793	+				-0.1
2,887,793	+				-0.2
2,887,793	+				-1.6
2,887,794	-				+0.2
2,887,803	-				+0.1
2,887,816	+				+1.6
2,887,844	-				+0.7
2,887,877	+				-1.2
2,887,898	+				-0.7
2,887,899	-				+0.5
2,887,959	+				-1.3
2,887,960	-				-0.7
2,887,960	-				-1.1
2,888,046	-		Sama_2404	0.11	+0.6
2,888,046	-		Sama_2404	0.11	+0.4
2,888,143	+		Sama_2404	0.19	-0.6
2,888,143	+		Sama_2404	0.19	+0.2
2,888,143	+		Sama_2404	0.19	-0.7
2,888,144	-		Sama_2404	0.19	+0.6
2,888,144	-		Sama_2404	0.19	-0.2
2,888,144	-		Sama_2404	0.19	-0.8
2,888,144	-		Sama_2404	0.19	-1.0
2,888,144	-		Sama_2404	0.19	+0.6
2,888,147	+		Sama_2404	0.19	-0.7
2,888,147	+		Sama_2404	0.19	-1.2
2,888,147	+		Sama_2404	0.19	+0.5
2,888,147	+		Sama_2404	0.19	+0.7
2,888,147	+		Sama_2404	0.19	-1.7
2,888,147	+		Sama_2404	0.19	-0.2
2,888,147	+		Sama_2404	0.19	-1.8
2,888,147	+		Sama_2404	0.19	+1.8
2,888,147	+		Sama_2404	0.19	+1.7
2,888,148	-		Sama_2404	0.20	-0.5
2,888,148	-		Sama_2404	0.20	-0.6
2,888,148	-		Sama_2404	0.20	-1.2
2,888,148	-		Sama_2404	0.20	-1.3
2,888,200	+		Sama_2404	0.24	+6.8
2,888,200	+		Sama_2404	0.24	+0.4
2,888,200	+		Sama_2404	0.24	+0.1
2,888,200	+		Sama_2404	0.24	-1.0
2,888,200	+		Sama_2404	0.24	-1.5
2,888,201	-		Sama_2404	0.24	-1.9
2,888,201	-		Sama_2404	0.24	+0.7
2,888,201	-		Sama_2404	0.24	+0.5
2,888,202	+		Sama_2404	0.24	-0.8
2,888,202	+		Sama_2404	0.24	-0.1
2,888,202	+		Sama_2404	0.24	-0.8
2,888,203	-		Sama_2404	0.24	-0.6
2,888,349	+		Sama_2404	0.36	-0.1
2,888,350	-		Sama_2404	0.36	-0.7
2,888,373	+		Sama_2404	0.38	+0.4
2,888,427	+		Sama_2404	0.42	+1.7
2,888,652	+		Sama_2404	0.61	+0.1
2,888,652	+		Sama_2404	0.61	-2.1
2,888,652	+		Sama_2404	0.61	+0.6
2,888,805	-		Sama_2404	0.73	-0.5
2,888,805	-		Sama_2404	0.73	-0.8
2,888,805	-		Sama_2404	0.73	-1.6
2,888,818	-		Sama_2404	0.74	+0.2
2,888,859	-		Sama_2404	0.78	-1.7
2,888,956	+		Sama_2404	0.86	-0.6
2,888,956	+		Sama_2404	0.86	-1.6
2,888,956	+		Sama_2404	0.86	-1.5
2,888,982	+		Sama_2404	0.88	+1.7
2,889,114	+				+0.2
2,889,114	+				-0.4
2,889,115	-				+0.2
2,889,154	+				+0.1
2,889,154	+				+1.8
2,889,154	+				+3.2
2,889,155	-				+0.2
2,889,164	+				+0.8
2,889,166	+				+0.4
2,889,166	+				-0.3
2,889,166	+				+3.8
2,889,166	+				-0.0
2,889,166	+				-0.2
2,889,167	-				+0.1
2,889,167	-				-1.0
2,889,167	-				-0.3
2,889,169	+				+1.3
2,889,169	+				-0.9
2,889,169	+				+0.5
2,889,170	-				+1.3
2,889,170	-				-0.2
2,889,170	-				+1.2
2,889,170	-				-2.3
2,889,180	-				-0.8
2,889,229	+				+0.3
2,889,230	-				-1.2
2,889,230	-				+1.2
2,889,230	-				-0.1
2,889,249	-				+0.6
2,889,249	-				+0.1
2,889,354	+				-0.7
2,889,355	-				-1.4
2,889,418	+		Sama_2405	0.10	-0.1
2,889,419	-		Sama_2405	0.10	+0.8
2,889,433	-		Sama_2405	0.11	-0.5
2,889,452	+		Sama_2405	0.12	-0.3
2,889,467	+		Sama_2405	0.12	+0.5
2,889,508	-		Sama_2405	0.14	-0.0
2,889,550	-		Sama_2405	0.16	-0.3
2,889,651	+		Sama_2405	0.20	+0.6
2,889,673	+		Sama_2405	0.21	-0.1
2,889,694	-		Sama_2405	0.22	-2.0
2,889,850	+		Sama_2405	0.29	+0.3
2,889,893	+		Sama_2405	0.31	-0.1
2,889,894	-		Sama_2405	0.31	+0.6
2,889,894	-		Sama_2405	0.31	-0.1
2,889,894	-		Sama_2405	0.31	-0.7
2,889,904	+		Sama_2405	0.32	+0.5
2,889,986	+		Sama_2405	0.35	+0.5
2,889,986	+		Sama_2405	0.35	+0.4
2,889,987	-		Sama_2405	0.35	-1.2
2,890,026	-		Sama_2405	0.37	-0.8
2,890,026	-		Sama_2405	0.37	-0.8
2,890,082	+		Sama_2405	0.40	-1.0
2,890,082	+		Sama_2405	0.40	+0.4