Experiment: 36hr Phyto Lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02090 and BPHYT_RS02095 are separated by 283 nucleotides BPHYT_RS02095 and BPHYT_RS02100 are separated by 65 nucleotides BPHYT_RS02100 and BPHYT_RS02105 are separated by 111 nucleotides
BPHYT_RS02090: BPHYT_RS02090 - 2-nitropropane dioxygenase, at 481,918 to 482,877
_RS02090
BPHYT_RS02095: BPHYT_RS02095 - alpha/beta hydrolase, at 483,161 to 484,051
_RS02095
BPHYT_RS02100: BPHYT_RS02100 - AsnC family transcriptional regulator, at 484,117 to 484,587
_RS02100
BPHYT_RS02105: BPHYT_RS02105 - multidrug DMT transporter permease, at 484,699 to 485,601
_RS02105
Position (kb) 483
484
485 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 482.175 kb on + strand, within BPHYT_RS02090 at 482.178 kb on - strand, within BPHYT_RS02090 at 482.220 kb on - strand, within BPHYT_RS02090 at 482.270 kb on + strand, within BPHYT_RS02090 at 482.270 kb on + strand, within BPHYT_RS02090 at 482.271 kb on - strand, within BPHYT_RS02090 at 482.271 kb on - strand, within BPHYT_RS02090 at 482.271 kb on - strand, within BPHYT_RS02090 at 482.357 kb on - strand, within BPHYT_RS02090 at 482.357 kb on - strand, within BPHYT_RS02090 at 482.510 kb on + strand, within BPHYT_RS02090 at 482.510 kb on + strand, within BPHYT_RS02090 at 482.511 kb on - strand, within BPHYT_RS02090 at 482.514 kb on + strand, within BPHYT_RS02090 at 482.515 kb on - strand, within BPHYT_RS02090 at 482.877 kb on + strand at 482.877 kb on + strand at 482.877 kb on + strand at 483.078 kb on + strand at 483.079 kb on - strand at 483.079 kb on - strand at 483.079 kb on - strand at 483.348 kb on - strand, within BPHYT_RS02095 at 483.570 kb on - strand, within BPHYT_RS02095 at 483.570 kb on - strand, within BPHYT_RS02095 at 483.570 kb on - strand, within BPHYT_RS02095 at 483.674 kb on + strand, within BPHYT_RS02095 at 483.675 kb on - strand, within BPHYT_RS02095 at 483.675 kb on - strand, within BPHYT_RS02095 at 483.675 kb on - strand, within BPHYT_RS02095 at 483.675 kb on - strand at 483.794 kb on + strand, within BPHYT_RS02095 at 483.980 kb on + strand at 483.980 kb on + strand at 483.981 kb on - strand at 483.981 kb on - strand at 483.981 kb on - strand at 484.050 kb on - strand at 484.050 kb on - strand at 484.236 kb on - strand, within BPHYT_RS02100 at 484.605 kb on - strand at 484.828 kb on - strand, within BPHYT_RS02105 at 484.865 kb on + strand, within BPHYT_RS02105
Per-strain Table
Position Strand Gene LocusTag Fraction 36hr Phyto Lib only remove 482,175 + BPHYT_RS02090 0.27 +0.4 482,178 - BPHYT_RS02090 0.27 -0.8 482,220 - BPHYT_RS02090 0.31 -0.8 482,270 + BPHYT_RS02090 0.37 -0.2 482,270 + BPHYT_RS02090 0.37 -0.1 482,271 - BPHYT_RS02090 0.37 -1.9 482,271 - BPHYT_RS02090 0.37 +0.5 482,271 - BPHYT_RS02090 0.37 +0.8 482,357 - BPHYT_RS02090 0.46 -0.7 482,357 - BPHYT_RS02090 0.46 -0.4 482,510 + BPHYT_RS02090 0.62 +0.4 482,510 + BPHYT_RS02090 0.62 -0.7 482,511 - BPHYT_RS02090 0.62 -0.4 482,514 + BPHYT_RS02090 0.62 +0.8 482,515 - BPHYT_RS02090 0.62 +1.6 482,877 + +2.2 482,877 + +0.0 482,877 + -0.1 483,078 + +1.3 483,079 - -0.5 483,079 - +0.7 483,079 - -1.0 483,348 - BPHYT_RS02095 0.21 -0.1 483,570 - BPHYT_RS02095 0.46 -0.5 483,570 - BPHYT_RS02095 0.46 +1.0 483,570 - BPHYT_RS02095 0.46 -0.7 483,674 + BPHYT_RS02095 0.58 -0.5 483,675 - BPHYT_RS02095 0.58 -1.6 483,675 - BPHYT_RS02095 0.58 +0.0 483,675 - BPHYT_RS02095 0.58 +0.3 483,675 - +4.6 483,794 + BPHYT_RS02095 0.71 -1.3 483,980 + -0.0 483,980 + -1.9 483,981 - +0.5 483,981 - -0.2 483,981 - -0.0 484,050 - -0.7 484,050 - -0.1 484,236 - BPHYT_RS02100 0.25 -0.6 484,605 - +0.6 484,828 - BPHYT_RS02105 0.14 -0.9 484,865 + BPHYT_RS02105 0.18 -0.5
Or see this region's nucleotide sequence