Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35205

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,503,563	+				-0.6
3,503,563	+				-0.2
3,503,564	-				+0.4
3,503,567	+				+0.1
3,503,602	-				+0.3
3,503,666	-				+0.4
3,503,666	-				-0.5
3,503,710	+				-0.1
3,503,738	+				-0.7
3,503,739	-				-0.9
3,503,767	+				+0.1
3,503,776	+				-0.5
3,503,777	-				+1.6
3,503,777	-				+0.3
3,503,807	+				+0.4
3,503,808	-				+1.5
3,503,808	-				+0.4
3,503,912	+				-0.5
3,503,912	+				+0.4
3,503,913	-				-0.1
3,503,956	+				+0.7
3,503,957	-				-1.0
3,503,993	+				-0.4
3,503,993	+				+0.2
3,504,033	+				-1.6
3,504,044	+				+2.3
3,504,048	-				-0.7
3,504,179	+				+0.8
3,504,179	+				+1.1
3,504,249	+		BPHYT_RS35205	0.15	-2.2
3,504,275	+		BPHYT_RS35205	0.20	-0.9
3,504,508	-		BPHYT_RS35205	0.69	-0.9
3,504,683	-				+0.0
3,504,683	-				-0.4
3,504,792	-				-0.5
3,504,834	+				-0.2
3,504,834	+				-0.2
3,504,910	+				+0.7
3,504,910	+				+1.4
3,504,910	+				-0.5
3,504,910	+				-1.1
3,504,955	+				-1.2
3,504,955	+				-0.1
3,504,956	-				-0.2
3,504,956	-				-0.6
3,505,012	-				-0.0
3,505,012	-				+1.4
3,505,012	-				-1.1
3,505,012	-				+0.2
3,505,014	-				-0.2
3,505,014	-				-0.6
3,505,014	-				-0.1
3,505,381	-				-0.1
3,505,451	+				-0.3
3,505,451	+				+0.2
3,505,452	-				-1.1
3,505,452	-				-1.8