Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34400

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,324,380	-		BPHYT_RS34395	0.55	+0.8
3,324,380	-		BPHYT_RS34395	0.55	-0.9
3,324,574	+		BPHYT_RS34395	0.87	+0.4
3,324,575	-		BPHYT_RS34395	0.88	-0.3
3,324,575	-		BPHYT_RS34395	0.88	+0.5
3,324,607	+				-0.8
3,324,688	-				-0.7
3,324,727	-				-0.2
3,324,727	-				-2.4
3,324,727	-				-1.5
3,324,926	+		BPHYT_RS34400	0.46	-2.3
3,324,928	+		BPHYT_RS34400	0.47	-3.5
3,325,051	-				-0.1
3,325,120	+				-0.0
3,325,120	+				+1.8
3,325,121	-				-0.1
3,325,124	+				+0.2
3,325,125	-				+0.1
3,325,145	+				+0.2
3,325,146	-				-0.7
3,325,192	-				+0.4
3,325,226	+				-0.9
3,325,237	-				-1.6
3,325,237	-				+0.3
3,325,275	+				+1.3
3,325,276	-				-0.5
3,325,297	+				-0.3
3,325,297	+				+0.0
3,325,325	-				-1.6
3,325,325	-				+0.2
3,325,377	+				-1.1
3,325,377	+				-0.7
3,325,378	-				+0.0
3,325,388	+				+4.0
3,325,389	-				-0.4
3,325,398	+		BPHYT_RS34405	0.10	-2.3
3,325,399	-		BPHYT_RS34405	0.10	+1.7
3,325,399	-		BPHYT_RS34405	0.10	+0.7
3,325,473	+		BPHYT_RS34405	0.14	+1.9
3,325,584	+		BPHYT_RS34405	0.19	+0.2
3,325,674	+		BPHYT_RS34405	0.23	+0.8
3,325,983	+		BPHYT_RS34405	0.37	+1.1
3,326,006	-		BPHYT_RS34405	0.38	+0.0
3,326,006	-		BPHYT_RS34405	0.38	+0.3
3,326,007	+		BPHYT_RS34405	0.38	-0.1