Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26855

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
1,597,325	-				-0.4
1,597,325	-				-0.1
1,597,393	+				+1.4
1,597,437	-				+0.1
1,597,598	+				-0.1
1,597,599	-				-3.1
1,597,675	+				-1.3
1,597,836	+		BPHYT_RS26855	0.15	-1.9
1,597,862	+		BPHYT_RS26855	0.18	+0.8
1,597,871	-		BPHYT_RS26855	0.19	+2.4
1,597,920	-		BPHYT_RS26855	0.24	+0.1
1,598,337	-		BPHYT_RS26855	0.71	+0.1
1,598,540	+				-0.4
1,598,550	+				-1.1
1,598,551	-				-0.0
1,598,551	-				-0.2
1,598,551	-				+0.4
1,598,829	+				-1.5
1,598,830	-				+0.4
1,598,830	-				-0.5
1,598,830	-				-1.0
1,599,008	+				+0.9
1,599,161	+				-1.1
1,599,162	-				+1.1
1,599,162	-				-0.3
1,599,162	-				+0.4
1,599,164	-				-1.0
1,599,285	-		BPHYT_RS26860	0.12	-2.3
1,599,285	-		BPHYT_RS26860	0.12	+0.7