Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19465

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
4,379,028	+		BPHYT_RS19460	0.61	+0.3
4,379,029	-		BPHYT_RS19460	0.61	+0.5
4,379,029	-		BPHYT_RS19460	0.61	+0.4
4,379,029	-		BPHYT_RS19460	0.61	-0.1
4,379,029	-		BPHYT_RS19460	0.61	-0.3
4,379,192	-		BPHYT_RS19460	0.75	+1.5
4,379,292	+		BPHYT_RS19460	0.84	+0.9
4,379,293	-		BPHYT_RS19460	0.84	+0.4
4,379,293	-		BPHYT_RS19460	0.84	-0.4
4,379,293	-		BPHYT_RS19460	0.84	+0.3
4,379,293	-		BPHYT_RS19460	0.84	-0.2
4,379,293	-		BPHYT_RS19460	0.84	-1.7
4,379,293	-		BPHYT_RS19460	0.84	+0.5
4,379,338	+		BPHYT_RS19460	0.88	-1.1
4,379,339	-		BPHYT_RS19460	0.88	+1.5
4,379,381	-				-1.0
4,379,381	-				-0.1
4,379,548	+				-0.0
4,379,549	-				+0.2
4,379,620	-				-0.5
4,379,634	+				-1.1
4,379,720	-				-1.1
4,379,749	-				-0.2
4,379,823	+				-0.7
4,379,823	+				-0.7
4,379,823	+				+0.2
4,379,844	-				+0.3
4,380,143	+		BPHYT_RS19465	0.25	-0.8
4,380,143	+		BPHYT_RS19465	0.25	+0.1
4,380,144	-		BPHYT_RS19465	0.25	+1.5
4,380,144	-		BPHYT_RS19465	0.25	+1.5
4,380,221	-		BPHYT_RS19465	0.32	+0.6
4,380,221	-		BPHYT_RS19465	0.32	-0.3
4,380,286	+		BPHYT_RS19465	0.37	-0.3
4,380,289	+		BPHYT_RS19465	0.37	-0.8
4,380,289	+		BPHYT_RS19465	0.37	-1.0
4,380,289	+		BPHYT_RS19465	0.37	-0.4
4,380,289	+		BPHYT_RS19465	0.37	+0.1
4,380,290	-		BPHYT_RS19465	0.37	-0.0
4,380,290	-		BPHYT_RS19465	0.37	-0.2
4,380,290	-		BPHYT_RS19465	0.37	-0.5
4,380,290	-		BPHYT_RS19465	0.37	-1.7
4,380,302	-		BPHYT_RS19465	0.38	-1.6
4,380,747	+		BPHYT_RS19465	0.77	-1.1
4,380,747	+		BPHYT_RS19465	0.77	+0.9
4,380,748	-		BPHYT_RS19465	0.77	-0.4
4,380,748	-				+0.9
4,380,748	-		BPHYT_RS19465	0.77	-0.1
4,380,823	+		BPHYT_RS19465	0.83	-0.1
4,380,824	-		BPHYT_RS19465	0.83	-1.0
4,381,031	-				+0.2
4,381,159	+				+1.3
4,381,230	+				-0.5
4,381,253	+				+0.5
4,381,372	-				+0.9
4,381,377	+				+1.4
4,381,384	+				+0.5
4,381,384	+				+1.0
4,381,385	-				+0.2
4,381,385	-				+1.5
4,381,390	-				-0.4
4,381,434	-				+0.1
4,381,434	-				+0.0
4,381,436	-				-0.7
4,381,763	-		BPHYT_RS19470	0.23	-0.3
4,381,763	-		BPHYT_RS19470	0.23	-1.2
4,381,816	-		BPHYT_RS19470	0.29	-0.0