Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16155

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,663,133	-		BPHYT_RS16150	0.51	-0.7
3,663,175	-		BPHYT_RS16150	0.55	+0.2
3,663,175	-		BPHYT_RS16150	0.55	-0.5
3,663,175	-		BPHYT_RS16150	0.55	-0.2
3,663,240	+		BPHYT_RS16150	0.61	-0.2
3,663,240	+		BPHYT_RS16150	0.61	+0.3
3,663,240	+		BPHYT_RS16150	0.61	-1.0
3,663,241	-		BPHYT_RS16150	0.61	+0.3
3,663,241	-		BPHYT_RS16150	0.61	-0.1
3,663,268	-		BPHYT_RS16150	0.64	+0.3
3,663,406	+		BPHYT_RS16150	0.76	+1.3
3,663,537	+		BPHYT_RS16150	0.88	-1.2
3,663,537	+		BPHYT_RS16150	0.88	+0.2
3,663,537	+		BPHYT_RS16150	0.88	+0.5
3,663,538	-		BPHYT_RS16150	0.88	-0.4
3,663,538	-		BPHYT_RS16150	0.88	-0.9
3,663,538	-		BPHYT_RS16150	0.88	-0.4
3,663,557	-		BPHYT_RS16150	0.90	-1.6
3,663,686	-				-0.5
3,663,826	+				-1.2
3,663,827	-				-1.4
3,663,853	+				-2.0
3,663,853	+				+1.3
3,663,854	-				-0.3
3,664,367	+		BPHYT_RS16155	0.31	-0.1
3,664,489	+		BPHYT_RS16155	0.40	-1.2
3,664,490	+		BPHYT_RS16155	0.40	-0.0
3,664,490	+		BPHYT_RS16155	0.40	+0.8
3,664,490	+		BPHYT_RS16155	0.40	-0.4
3,664,490	+		BPHYT_RS16155	0.40	+0.7
3,664,491	-		BPHYT_RS16155	0.40	-0.8
3,664,491	-		BPHYT_RS16155	0.40	+0.2
3,665,225	-		BPHYT_RS16155	0.89	-2.4
3,665,289	-				-0.6
3,665,339	-				-2.0
3,665,414	-				+0.3
3,665,443	+				+1.2
3,665,549	+				+0.4
3,665,566	-				+0.1
3,665,566	-				-0.2
3,665,704	-				-0.1
3,665,704	-				-0.2
3,665,704	-				-0.8
3,665,704	-				+0.4
3,665,808	+				-0.1
3,665,808	+				+1.7
3,665,809	-				+1.1
3,665,809	-				+0.1
3,665,809	-				-0.1
3,665,896	+				-2.0
3,665,897	-				-0.6
3,665,897	-				-0.3
3,666,305	-		BPHYT_RS16160	0.35	+0.2
3,666,319	+		BPHYT_RS16160	0.36	-3.0
3,666,320	-		BPHYT_RS16160	0.36	-1.1