Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15270

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,471,256	-		BPHYT_RS15265	0.45	-0.2
3,471,347	-		BPHYT_RS15265	0.53	+0.1
3,471,353	+		BPHYT_RS15265	0.53	+0.5
3,471,353	+		BPHYT_RS15265	0.53	+0.1
3,471,354	-		BPHYT_RS15265	0.53	-0.2
3,471,930	+				+0.2
3,471,930	+				+0.0
3,471,930	+				+0.5
3,471,930	+				-0.5
3,471,930	+				-0.7
3,471,930	+				+0.5
3,471,930	+				-1.3
3,471,931	-				+0.3
3,471,931	-				+0.5
3,471,931	-				+0.2
3,471,931	-				-0.0
3,471,931	-				+0.1
3,471,931	-				+0.1
3,471,931	-				+0.7
3,471,972	-				+0.9
3,472,012	-				-0.4
3,472,247	-				-0.7
3,472,600	-				+0.5
3,472,633	-				-0.5
3,472,807	+				+0.1
3,472,807	+				-0.4
3,472,807	+				-0.6
3,472,807	+				+0.9
3,472,808	-				+0.8
3,472,808	-				+0.8
3,472,808	-				+0.7
3,472,808	-				-0.5
3,472,808	-				+1.5
3,472,812	-				-0.9
3,472,838	+				-0.1
3,472,841	+				-1.3
3,472,893	+		BPHYT_RS15275	0.12	-1.8
3,472,893	+		BPHYT_RS15275	0.12	+1.8
3,472,894	-		BPHYT_RS15275	0.12	-1.1
3,472,894	-		BPHYT_RS15275	0.12	+1.0
3,472,894	-		BPHYT_RS15275	0.12	-0.0
3,473,039	-		BPHYT_RS15275	0.70	-0.1
3,473,039	-		BPHYT_RS15275	0.70	+1.1
3,473,042	+		BPHYT_RS15275	0.71	-0.1
3,473,043	-		BPHYT_RS15275	0.72	+1.1