Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13705

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
3,121,865	+		BPHYT_RS13700	0.36	-0.3
3,121,866	-		BPHYT_RS13700	0.36	-0.4
3,121,866	-		BPHYT_RS13700	0.36	-0.9
3,122,001	-		BPHYT_RS13700	0.45	+0.0
3,122,001	-		BPHYT_RS13700	0.45	+0.4
3,122,122	-		BPHYT_RS13700	0.53	+0.7
3,122,235	+		BPHYT_RS13700	0.61	+0.6
3,122,596	+		BPHYT_RS13700	0.86	+0.1
3,122,597	-		BPHYT_RS13700	0.86	+0.1
3,123,495	+		BPHYT_RS13705	0.58	-0.2
3,123,495	+		BPHYT_RS13705	0.58	-0.6
3,123,496	-		BPHYT_RS13705	0.58	-1.8
3,123,630	+		BPHYT_RS13705	0.70	-0.5
3,123,630	+		BPHYT_RS13705	0.70	+0.6
3,123,995	-				-2.5
3,123,995	-				+0.8
3,123,997	+				-0.9
3,123,998	-				-0.3
3,123,998	-				-0.7
3,123,998	-				+0.5
3,124,062	-				-0.1
3,124,062	-				-0.4
3,124,063	+				-1.8
3,124,063	+				-0.0
3,124,064	-				+1.4
3,124,212	+				-0.0
3,124,212	+				-0.6
3,124,707	-		BPHYT_RS13710	0.19	+0.6
3,124,961	-		BPHYT_RS13710	0.32	-1.2