Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10185

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,318,193	+		BPHYT_RS10180	0.26	-1.1
2,318,538	-		BPHYT_RS10180	0.60	+0.5
2,318,563	+		BPHYT_RS10180	0.63	-0.5
2,318,567	+		BPHYT_RS10180	0.63	-0.4
2,318,568	-		BPHYT_RS10180	0.63	-2.1
2,318,744	+		BPHYT_RS10180	0.81	-0.0
2,319,182	+		BPHYT_RS10185	0.30	+0.5
2,319,182	+				-0.6
2,319,182	+		BPHYT_RS10185	0.30	+0.8
2,319,428	-		BPHYT_RS10185	0.80	-0.1
2,319,604	-				-0.6
2,319,627	+				-0.4
2,319,627	+				+0.7
2,319,784	-				-2.0
2,319,784	-				+0.7
2,319,844	-				+0.6
2,319,844	-				-1.0
2,319,885	+		BPHYT_RS10190	0.11	-0.5
2,320,308	+		BPHYT_RS10190	0.38	-1.2
2,320,308	+		BPHYT_RS10190	0.38	-0.0
2,320,309	-		BPHYT_RS10190	0.38	-0.0
2,320,377	+		BPHYT_RS10190	0.43	-3.8
2,320,398	+		BPHYT_RS10190	0.44	-0.5
2,320,398	+		BPHYT_RS10190	0.44	-0.8
2,320,428	+		BPHYT_RS10190	0.46	-1.1