Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09090

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,056,163	-		BPHYT_RS09085	0.18	-0.3
2,056,224	+		BPHYT_RS09085	0.26	-1.1
2,056,268	-		BPHYT_RS09085	0.31	+1.7
2,056,268	-		BPHYT_RS09085	0.31	+1.6
2,056,268	-		BPHYT_RS09085	0.31	+1.0
2,056,800	-				+1.0
2,056,829	+				-1.6
2,056,865	-				+0.9
2,057,112	-		BPHYT_RS09090	0.26	-0.2
2,057,235	-		BPHYT_RS09090	0.40	+0.0
2,057,366	+		BPHYT_RS09090	0.56	-1.3
2,057,494	+		BPHYT_RS09090	0.72	-0.9
2,057,495	-		BPHYT_RS09090	0.72	+0.7
2,057,537	+		BPHYT_RS09090	0.77	+0.0
2,057,538	-		BPHYT_RS09090	0.77	-0.1
2,057,602	+		BPHYT_RS09090	0.85	+0.5
2,057,603	-		BPHYT_RS09090	0.85	+0.7
2,057,603	-		BPHYT_RS09090	0.85	+0.4
2,058,211	+		BPHYT_RS09095	0.35	-0.6
2,058,277	+		BPHYT_RS09095	0.41	+0.2
2,058,278	-		BPHYT_RS09095	0.41	-0.4
2,058,698	-		BPHYT_RS09095	0.85	-1.5