Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08985

Experiment: 36hr PHYTO11 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO11 MOI 1
2,032,433	-				+1.0
2,032,433	-				+0.1
2,032,433	-				-0.5
2,032,453	+				+0.0
2,032,657	+		BPHYT_RS08980	0.26	-1.6
2,032,771	+		BPHYT_RS08980	0.47	+1.3
2,032,771	+		BPHYT_RS08980	0.47	+0.3
2,032,771	+		BPHYT_RS08980	0.47	-0.2
2,032,771	+		BPHYT_RS08980	0.47	+0.0
2,032,950	-		BPHYT_RS08980	0.80	+0.2
2,032,969	+		BPHYT_RS08980	0.84	+0.6
2,033,083	-				+0.6
2,033,152	+				+0.4
2,033,209	-				+1.3
2,033,316	+				+0.3
2,033,349	+				-0.7
2,033,349	+				+0.4
2,033,350	-				+1.5
2,033,377	+				-0.2
2,033,377	+				+1.3
2,033,378	-				-0.3
2,033,392	-				-1.3
2,033,406	-				+0.8
2,033,417	-		BPHYT_RS08985	0.11	+0.3
2,033,459	+		BPHYT_RS08985	0.20	-0.8
2,033,460	-		BPHYT_RS08985	0.20	-1.8
2,033,746	+				-1.2
2,033,747	-		BPHYT_RS08985	0.77	-1.1
2,033,747	-		BPHYT_RS08985	0.77	-1.9
2,033,896	+				+0.4
2,033,897	-				+1.3
2,034,002	+				+0.8
2,034,060	+				-0.4
2,034,060	+				-1.4
2,034,060	+				+0.3
2,034,060	+				-0.1
2,034,061	-				-1.3
2,034,062	+				+0.7
2,034,063	-				-0.2
2,034,063	-				+0.0
2,034,468	+		BPHYT_RS08990	0.19	-0.0